Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1919 ATGGCAATATCAGCAACCGCATCATATGTTCCAACAGAAGGGGCATTTTCTGCTGTGTGCTACTTCAGGATCAGAAGACTGGCTCAAAATTGTGAGGCTGCTAAGAAGAGTCGATTGAGGAAGAAGGCATATGTGCAGCAATTGGAGAATAGTAGATATGGTTTTGTTGTTATTTCTGCTTACCATTATGTCCATGGGATGATGTTTCCTTTGGGTGTATTTGCTGCAACTGGAACTGTGTGGGAGCATGCTTGCGCAGTTGTCGGAAATGGTAACATTTATAAAGCCAGAGAATGTTTACCTGAGTTATTAGGTGCCTTAGCATTTGATATGAACTTTATGCGCTGGATTAATCAACATCATCGGCTGATTAGTGACATAAGATCAGCCGTAAATTCTCAAATGGGTGATAATGAATTGAATCTTCTTATCGATGGTGTCTTGGCATGTCCTGATGAACTATTACAGGTAAAAACCATAGGGGCCAAGGAAGATGTATTTCACATACTTTCTGGAACATGGAAGACACATGCAGAAAGATGCTTCATGTGGCTAGGTGGATTCCGTCGATCAGAGCTTCTTAAGGCTTATGGACTATTCATGGATTGTGGTGGTGTTGGAGGAAATCTAAGCTCTCATGGGTTAATTTTAGAGAAGACATCATCTCCTATAGGAGTTCTCTTAATTGTTTTTGAATCTTGCCCTGATGCACTTGTACAGAACATGGAAGCATGTGCAGCGACTAATCATCATATTGCAAGAATCACCTCTCATCTTCAGTCACCCAATTTCAAGGATGGTGGTGATCAAAAGGAGGGGCACCGGGATTCAAGGTCTCAAGACAAACCTCCTAAGTACTAA 861 0.4158 MAISATASYVPTEGAFSAVCYFRIRRLAQNCEAAKKSRLRKKAYVQQLENSRYGFVVISAYHYVHGMMFPLGVFAATGTVWEHACAVVGNGNIYKARECLPELLGALAFDMNFMRWINQHHRLISDIRSAVNSQMGDNELNLLIDGVLACPDELLQVKTIGAKEDVFHILSGTWKTHAERCFMWLGGFRRSELLKAYGLFMDCGGVGGNLSSHGLILEKTSSPIGVLLIVFESCPDALVQNMEACAATNHHIARITSHLQSPNFKDGGDQKEGHRDSRSQDKPPKY* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1919 286 MobiDBLite consensus disorder prediction 265 286 - -
Amo01g1919 286 PANTHER TRANSCRIPTION FACTOR TGA9 24 196 - -
Amo01g1919 286 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 206 261 IPR016162 GO:0016491
Amo01g1919 286 Gene3D - 23 55 - -
Amo01g1919 286 MobiDBLite consensus disorder prediction 260 286 - -
Amo01g1919 286 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Amo01g1919 286 ProSiteProfiles DOG1 domain profile. 106 286 IPR025422 GO:0006351|GO:0043565
Amo01g1919 286 SUPERFAMILY Leucine zipper domain 23 50 IPR046347 GO:0003700|GO:0006355
Amo01g1919 286 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 24 196 - -
Amo01g1919 286 Pfam Seed dormancy control 124 195 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1919 Amo-Chr1 53521859 53524666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1919 24 244 bZIP Transcription Factor Family AT1G68640 43.556 6.84e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1919 K14431 - csin:114285654 186.037