Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1905 ATGGTCGCTATGTTCCTCTCTTCAATAACTCCTCTCTTTGAAAACCTTAACCATTACTACACCAACAACAACACCACACCCTTCCTCATAATTGCTTTCACCGTCATCTCCACACTAACATGGCTCCTCTTCCTCAGGCCCAACATGGCCCACCGCAACCTCCCACCAGGCCCACCGGGCCTCCCCATCTTCGGCAACCTCCTCTCCCTTGACCCAGACCTCCACACCTACTTCTTATCCCTGGCCCATACCTACGGCCCAATCTTCAAGATCCAGCTCGGCAGCAAGCTAGGCATCGTCATAACCTCTCCTTCGATGGTCCGCGAAGTCCTCAAGGAACACGACTCCGTTTTCGCCAACCGCGACGTCCCTGCCGCTGGAAGAGCCGCCACCTACGGCGGAGCTGACATCGCATGGGCACCATACGGCCCCGAGTGGCGTATGCTGAGAAAAGTATGCGTCCTCAAGATGCTGAGCAACAACACTCTCGACTCCGTCTACGAGCTCCGCCGGAATGAGGTCCGAAAAATGGTCAGGTTCTTGCACGATCGGGTCGGTTCAGAGGTGAACGTTGGGGAGCAAGTGTTCCTAACTGTGCTGAATGTGATAACGGAGATGATGTGGGGAGGGGCGGTGGAGGGGCAGGAGAGGGAGGGATTGGGGGCGGAATTCAGGGAAGTGGTGGCGGAGATGACGCACCTACTTGGGAAGCCGAACGTGTCGGATTTTTTTCCCGCGTTGGCACGGTTTGATTTACAGCGGGTGGAGAAGCAGATGCACGCGCTGGTGCCGCGGTTCGATGGGATCTTCGAGAGGAAGATTGGCGAGAGGGTGAAAGAAGGGAACAAGAAGAGCAATGATTTCTTGCAGTTTCTGTTGAACTTGAGGGAGGAAGCTGACTCCAAGACTCCACTCACCATGGTTCAGCTCAAGGCATTACTCATGGACATGGTGGTGGGTGGATCTGACACATCCGCTAACACAATCGAATTTGCTATGGCTGAAATGATAAAAAATTCAGAGGTAATGAAGAAAGTCCAAGAAGAACTAGAAGCAGTGGTTGGCAGAGACAACATGGTAGAAGAATCACACATTCACAAGCTACCTTACTTGTGTGCAGTAATGAAAGAAACCCTTCGATTGCACCCAGCACTTCCACTCTTAATCCCTCACCGCCCCAGTGAAACCACCACCATCGGAGGATACACAGTTCCAAAGGATTCTCGCGTGTTCGTGAACGTGTGGGCCATACACAGAGACCCTTCTATTTGGGACAATCCACTTGAGTTTGATCCTACTAGGTTCTTAAGGGATGATGATGGTGGTGCCAACAAATGGGATTTTAGTGGCAGTGACTTCACGTATTTCCCATTTGGTTCCGGAAGAAGAATATGTGCTGGGATCGCAATGGCTGAAAGGACAGTTCTGTATTTTCTTGCCACCCTTGTGCATTCCTTTGACTGGAGGGTAATTGATGGTGAAAAACTTGATATATCAGAAAAGTTTGGTATTGTTCTTAAGAAGAAGACACCTTTAGTTGTTATTCCCAAGTTACGACTATCTAATTTAGGTCTTTATAAGTAG 1584 0.5025 MVAMFLSSITPLFENLNHYYTNNNTTPFLIIAFTVISTLTWLLFLRPNMAHRNLPPGPPGLPIFGNLLSLDPDLHTYFLSLAHTYGPIFKIQLGSKLGIVITSPSMVREVLKEHDSVFANRDVPAAGRAATYGGADIAWAPYGPEWRMLRKVCVLKMLSNNTLDSVYELRRNEVRKMVRFLHDRVGSEVNVGEQVFLTVLNVITEMMWGGAVEGQEREGLGAEFREVVAEMTHLLGKPNVSDFFPALARFDLQRVEKQMHALVPRFDGIFERKIGERVKEGNKKSNDFLQFLLNLREEADSKTPLTMVQLKALLMDMVVGGSDTSANTIEFAMAEMIKNSEVMKKVQEELEAVVGRDNMVEESHIHKLPYLCAVMKETLRLHPALPLLIPHRPSETTTIGGYTVPKDSRVFVNVWAIHRDPSIWDNPLEFDPTRFLRDDDGGANKWDFSGSDFTYFPFGSGRRICAGIAMAERTVLYFLATLVHSFDWRVIDGEKLDISEKFGIVLKKKTPLVVIPKLRLSNLGLYK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1905 527 PANTHER OS08G0547900 PROTEIN 21 527 - -
Amo01g1905 527 Pfam Cytochrome P450 55 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Amo01g1905 527 Gene3D Cytochrome P450 44 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 SUPERFAMILY Cytochrome P450 55 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1905 527 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 21 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1905 Amo-Chr1 52369231 52371974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1905 24 526 Cytochrome P450 AT4G12320 57.339 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1905 - - gmx:100787507 751.895