Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1870 ATGAAAAATGCGACATTCCTTAGTGAAGACAACCAGGCTCATTTTCTTGGACTAAAACGAAATCTCATTCCTCAAGCAACTCTGTTTTCTTTTGTGGAGCTGATTTTAACTATCATAAAATTTCTCTCAGAGATGTTTCACTTTTATTGGATCAAGGATTCAAGACACAAACGCACTGCTTCTTTCACCCATTGTCAAATGACATGTCCATATGTGGCTATGATATGGAAGAAAAAGCTGCAAGGACTTATGATCTTTGCAGCCCTTAAGTATTGGGGACCTTCAACACACATAAACTTCCCAAACTTGTTATGTGGGTTGTGCAATTGGGAATGTGATAAGGATACTGTTAGAGAGGGCAAGCACGTTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACCTTTATTCATGTGACTGATTTGTCGAGAAAGAAAACCCTTGTCCGCATCACTCTCTCTTGTGAAAATGGTACCCACTAG 486 0.3909 MKNATFLSEDNQAHFLGLKRNLIPQATLFSFVELILTIIKFLSEMFHFYWIKDSRHKRTASFTHCQMTCPYVAMIWKKKLQGLMIFAALKYWGPSTHINFPNLLCGLCNWECDKDTVREGKHVFGVAHIFASFNDTFIHVTDLSRKKTLVRITLSCENGTH* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1870 161 Gene3D Ribosomal protein S11 109 159 IPR036967 GO:0003735|GO:0005840|GO:0006412
Amo01g1870 161 PANTHER BNAA05G27530D PROTEIN 117 153 - -
Amo01g1870 161 SUPERFAMILY Translational machinery components 120 153 - -
Amo01g1870 161 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 117 153 IPR001971 GO:0003735|GO:0005840|GO:0006412
Amo01g1870 161 Pfam Ribosomal protein S11 125 155 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1870 Amo-Chr1 50570114 50574125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1870 116 153 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 81.579 4.30e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1870 K02955 - adu:107467859 339.732