Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1812 ATGATAGTAATAACCCGATGTAACCACGAGAATCAAATCTCTCTCCAATGGAAAGGTGGGGACGCCATTACGTCGACTGTTAACCCAAGGGAGAGGCAGCTTGTAGGCATGAACCCCAAGCATGTGATGTTGAAATGGGTGCGTCGTCTTGGGCCTGGAAGCTCTTTAAAGAACAGGTATGTTGCATTGGGCCTAAGCCCAATAGAGGTAGTACCGAAGGGACATATGGCAATTTATGTTGGAGAATGGGAGGGAGAGAAGCAACGAGTTTTGGTGCCCGTTACACACTTGAACCACCCTTTGCTTGGGAAGCTTCTAGAGAAGGCAGAGAAAGTGTATGGGTTTGATCATCCAGGTGTAATAACCATACCTTGTGGAATATCAGAGTTCCAGAAAGTTCAGCAGAATATTTACTCGGCACAACGACTCCAAAGGCGACGCCAAATATGTTGCTCTATCTATATCTATAATACCAAATACTAA 483 0.4513 MIVITRCNHENQISLQWKGGDAITSTVNPRERQLVGMNPKHVMLKWVRRLGPGSSLKNRYVALGLSPIEVVPKGHMAIYVGEWEGEKQRVLVPVTHLNHPLLGKLLEKAEKVYGFDHPGVITIPCGISEFQKVQQNIYSAQRLQRRRQICCSIYIYNTKY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1812 160 PANTHER - 33 153 - -
Amo01g1812 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 153 IPR003676 GO:0009733
Amo01g1812 160 Pfam Auxin responsive protein 69 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1812 Amo-Chr1 46676780 46677592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1812 67 131 Calmodulin-binding Proteins AT3G43120 49.231 9.76e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1812 K14488 - gmx:102668727 150.984