Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1797 ATGATTTTGAAGTTGTTTGGAGTTTCGGAGATATTACCAAAGAAATGGGTAGGTTCTAGTGGAGGTGGACCAAGAGAGCCATGGCATGGCATGATTTGCAAGGTTAAAGGGCTAGCAGCTTATGATATATTAATCAATTTCGAACAAAGATGGAGAAAAGTAAAAAAATGGCGAGACTTTAGACTCAACAAGGTCAAAAATTGGCACGACAATGCATTACTAAGGCTAGACCAGATATCATGGATAGTCAGTCCATCTTCGAGTTTTGGTGATGATAAAACTATCCAGGTGACCGACGAAAATGATCCTGAAACTTGGAATGTGCAGGTATTTTGGTCCATAGATTCAGGATCAGTGAAGGGTTTTCCAAAGATTTCGACAAGGCTCAATCTCAGGGAGAGAAAAAGAATCAAATGCTTTGATCACGATTACAACTCCTTAGGGAAGGTAGACAAGTCTCCTCTGGAAAGATTTTGTGGTTGA 483 0.3996 MILKLFGVSEILPKKWVGSSGGGPREPWHGMICKVKGLAAYDILINFEQRWRKVKKWRDFRLNKVKNWHDNALLRLDQISWIVSPSSSFGDDKTIQVTDENDPETWNVQVFWSIDSGSVKGFPKISTRLNLRERKRIKCFDHDYNSLGKVDKSPLERFCG* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1797 160 PANTHER PHOSPHOLIPASE D 16 127 - -
Amo01g1797 160 PANTHER PHOSPHOLIPASE D 16 127 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1797 Amo-Chr1 45690974 45694246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1797 23 139 Phospholipase D Gene Family (Wang group) AT4G35790 48.438 4.67e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1797 K01115 - ahf:112720191 249.595