Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1793 ATGGCAAGTGGATGGGTGAAATCGTTGCATTGCAAGTCAAGAGCATTTGAAGATGTTTACCATCCTACCCCCAGCAAAATATTGATACCCAGTGCTAGCTGCAGGAGGAGCTTCCAGACCATTAAAGAAATGGTTGATATTCCAAAGCCCATGCCGAAGCCCAAGCCCATGCCAAAGCCCATGCCGAGGTCAAGGAAAAACAAGAATAGTCTTCTTGAGAAGCATCCGAAGCTGCCCGACGGGCATCCTTCGAGGAATGTAGTGGAGATTATATTTCACACGAGTTGGGGCCCAAAACCGTTCCCGGGCCGTGTGGAGGTGATATTCAAGATCCAGAACGGGGCCCGGACGGTTTCGCGGTTTGAGGAGTTTCGCGAGGGTGTTAAGGCCCGGGCCGCGGCATGTTCTGCAGGCCTGATGGGCGAGGAAGGGAGCAACTGGGAGAAGGAGAATGCGCGGTGCGTGGCGGACGGGAATGAGGTTATGCGGTTCCAATGCTTGGGTCCCACGGAGGACGGCGCCGCCGCGGTGTGGTCGTTTCCGGAGAGGAAGGGCTCGATAATCTGCACGTTTTCCGGCAGTGGTGGTGCACACGAGAGCGCCGGCGGCGGCAGGGGAAGGAGGGCGATGCTCGTTTGCCGGGTAGTTGCGGGTCGGGTCTCGAAGCAACTCGGGATCGCTGACTCGGGGTTGGAGAAGCGAGTTGGGTTTGACTCGGTGAGTGGGGAAAACGGCGAGTTGTTAGTGTTCGACTCGCGGGCCGTGTTGCCCTGTTTTCTTATTATTTACAGATTGTAA 798 0.5627 MASGWVKSLHCKSRAFEDVYHPTPSKILIPSASCRRSFQTIKEMVDIPKPMPKPKPMPKPMPRSRKNKNSLLEKHPKLPDGHPSRNVVEIIFHTSWGPKPFPGRVEVIFKIQNGARTVSRFEEFREGVKARAAACSAGLMGEEGSNWEKENARCVADGNEVMRFQCLGPTEDGAAAVWSFPERKGSIICTFSGSGGAHESAGGGRGRRAMLVCRVVAGRVSKQLGIADSGLEKRVGFDSVSGENGELLVFDSRAVLPCFLIIYRL* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1793 265 Gene3D - 186 265 - -
Amo01g1793 265 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 70 - -
Amo01g1793 265 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 77 264 - -
Amo01g1793 265 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 70 - -
Amo01g1793 265 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 77 264 - -
Amo01g1793 265 MobiDBLite consensus disorder prediction 47 80 - -
Amo01g1793 265 SUPERFAMILY ADP-ribosylation 78 264 - -
Amo01g1793 265 MobiDBLite consensus disorder prediction 66 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1793 Amo-Chr1 45375788 45376696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1793 68 265 C2H2 Transcription Factor Family AT2G29660 37.143 1.72e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1793 - - gmx:100811674 342.813