Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1774 ATGTCGTTGCTTCTTCTCTCCGTCGCACGAGCTGCTTCCGCCGCTACCGGTTTTGCCGCCGTTAGCATCGCACGATCTCACTCTGTCATCCCTTGCGTCACACGAGCTCCTTCTGTTGCCATTCTTGTCGCGTCTACTCCCATCGTCGCAGAGCTTTCTCCACCGCTGCTTTCATCGCATATGCTCCCTCTGGCACCTCTTCCATCTAATCTCAACAACTTGCTCTCTCAGTTCTTCTCGGTTGTTGAATATCAAGTCAAATCTGCAGCACAACATCTGATTAAGGAACCATTGTCTATTGATTCTTGCAACTGCAATTTCCCTCTATGCCAATCATTGGAGAAGGACTTGCGTAAATCAAAACAGGAGACCTCTGACTATCAGAATCTTTGTTGGCAGTTGGAAAAGGAACTTAAGGACCTGACAGATCAAGAACAACAAATGAAGCCAAAGGCTGAGAGACAAGAGGCCAGTAATGCTTCTAATAGCAATGAGCAACATGACATGGAGACCAATTCTGCTCGTGTTGCAGCAAATGAAGATGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATGGTAAGTGTATGACAAAACAAGCATTAGGTGGACGAGTTCGCATCTTGTTATTAGGAGCTGCTCCTTTGCCTAGACATGTTGAGGAGTTTATGAGGGTCACTAGTGGATCTACATTATCACAAGGATATGGAAAAGATACTGATGCTACTGATATGGGAAAGAAGGGTAGTTGGTTTTCTGAAATAACGAGGGTTTTCACACACCACTCCAAGGAGAAGCAAAACTCTGTATTCACTCTTCAAAATTTGCAACAATCTCTTTTTACCACATGCAAGATTATTAACAAAACAAGGGCTCCTTCTCCGAGGGCTCCATCTCCAAGAGCTGCATCTCTGAAGGCTCCTTTTCTGCATGCTACCTCTCCCAAAGCTACTTCTTTCAGGGTTGTTCATCACCACAAGGAGGTTGGCTATAGACCGGAACCAACTTTAAGGAGGAAGAATGAAAGCTCAGACTCTTCACAGGGGCTCAGTGGATCAGAGCCAAAGACTGAGAGTGAAAAGGAGTGGGCAATCCGGTTACTCTCAATTGCATGCCTTTCTTTGGCTTCAAAGATGGAAAAATGCAGTGTACCTGAGCTATCAGTATTTCAGTCAAAAGATTACTGCTTTGAGAGCAAAGTGATTAGGAGAATGGAGATTTTGGTGCTAACCACATTGGATTGGAATATGAGCATTATAACCCCCTATGATTTCCTTCCTTATTTCATTACAAAGTTTTGCAATCAACCCCCAGAAACTACCATTTTTTCCAAGACCATGCAACTCATCTTCACCACAATCAAAGAGGTGGGCATAATGGATCACAAACCATCTGTTGTTGCAGCTGCAGCTACTTTGGTGTCATCGGATCAGCAACTAACCATAGAAGTTGTAGAGTTGAAGATTAGTTCAATTCCTCAACATAGGTTTCTTGATCCTGAGAATAATACAAGAAGAGACAATAATGTTTTGCATACGCCTAGTCCTTCAACAATTGACATGATAGAGAGCTCTCTAATTACTTCCTCTGCAGCTTTCAAGATTACAGAAAACACCTGA 1623 0.4331 MSLLLLSVARAASAATGFAAVSIARSHSVIPCVTRAPSVAILVASTPIVAELSPPLLSSHMLPLAPLPSNLNNLLSQFFSVVEYQVKSAAQHLIKEPLSIDSCNCNFPLCQSLEKDLRKSKQETSDYQNLCWQLEKELKDLTDQEQQMKPKAERQEASNASNSNEQHDMETNSARVAANEDVAKNSKDLFEQFDGKCMTKQALGGRVRILLLGAAPLPRHVEEFMRVTSGSTLSQGYGKDTDATDMGKKGSWFSEITRVFTHHSKEKQNSVFTLQNLQQSLFTTCKIINKTRAPSPRAPSPRAASLKAPFLHATSPKATSFRVVHHHKEVGYRPEPTLRRKNESSDSSQGLSGSEPKTESEKEWAIRLLSIACLSLASKMEKCSVPELSVFQSKDYCFESKVIRRMEILVLTTLDWNMSIITPYDFLPYFITKFCNQPPETTIFSKTMQLIFTTIKEVGIMDHKPSVVAAAATLVSSDQQLTIEVVELKISSIPQHRFLDPENNTRRDNNVLHTPSPSTIDMIESSLITSSAAFKITENT* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1774 540 MobiDBLite consensus disorder prediction 144 172 - -
Amo01g1774 540 Pfam Cyclin, N-terminal domain 365 419 IPR006671 -
Amo01g1774 540 MobiDBLite consensus disorder prediction 153 172 - -
Amo01g1774 540 Gene3D - 420 479 - -
Amo01g1774 540 Pfam Cyclin, C-terminal domain 421 478 IPR004367 -
Amo01g1774 540 PANTHER CYCLIN-D5-1 361 496 - -
Amo01g1774 540 CDD CYCLIN 362 411 IPR013763 -
Amo01g1774 540 Coils Coil 110 144 - -
Amo01g1774 540 Gene3D - 361 419 - -
Amo01g1774 540 SUPERFAMILY Cyclin-like 361 418 IPR036915 -
Amo01g1774 540 PANTHER CYCLINS 361 496 IPR039361 -
Amo01g1774 540 MobiDBLite consensus disorder prediction 332 358 - -
Amo01g1774 540 SUPERFAMILY Cyclin-like 404 493 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1774 Amo-Chr1 43206502 43211307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1774 360 480 Core Cell Cycle Gene Families AT5G65420 42.857 5.05e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1774 K18811 - ahf:112802995 236.113