Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1732 ATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAGTCTAGTTTCTGTTCTTGATCTGCAATTTTACAGTGAAGACCGACCTTCTCCAATTAAAAAGAATACAGAAACCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTAATAACATAGGGCATGCATTGAACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATCAAGTTCTTTGGAAAAATGACGATAATAGCGAGAAATTAACCATTTGTAGAGAGAAAAAAGATTTTGACCGTAAATACAAAGCAGAAGTATTGCTCACATCAAGGCTGCTCAGTAGCCCCAGCTTAATCCAGGCAGTTCATTCACCAGGTCACCTGATAAACCCCAAGTTGTTCTTTGCACTTGAACTATTGAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGCTGGGAAGATTCTTAGGATAAATAATCTTGAAGAAATGCAAAGAAAACTAATATTTGATGTTGTCAATGAGATTCTAGTACAAAAAATTAGTGTCTTAATATATGTATATTTTGGCTAA 639 0.3599 MNQNTATKELSKESAMAMITVTSEQQSLVSVLDLQFYSEDRPSPIKKNTETSKDLDEALATPNNIGHALNLPLSFNNTKANFSNGTSDDDLQTQNLDQVLWKNDDNSEKLTICREKKDFDRKYKAEVLLTSRLLSSPSLIQAVHSPGHLINPKLFFALELLKTNKLQFNMKHNAGKILRINNLEEMQRKLIFDVVNEILVQKISVLIYVYFG* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1732 212 PANTHER LONGIFOLIA PROTEIN 1 205 IPR033334 GO:0051513
Amo01g1732 212 Pfam Domain of unknown function (DUF4378) 122 204 IPR025486 -
Amo01g1732 212 PANTHER LONGIFOLIA PROTEIN 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1732 Amo-Chr1 40872046 40872863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1732 7 205 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 31.336 1.36e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1732 - - adu:107484478 380.178