Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1731 ATGGAGAATGATGGTAAAGAGTCGTATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCAATGAAAGTGATGATATGGTGGATGTAACTGTAGATAAAGCAGAGGCAGATATAATTAATGCTGGTGGTTTGGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAGTGCTATGAATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACATTTGGTTTGCAATAAAGCAGGAGAAAGATATTGGAAGCACCTTAAAAGGGACAATCGACAAAGGGAGCATAGGGCAATTACTCGTGCCAACTGCAAGGTGAGGATTCGGTTCATTCGTCACTATAGAACGGGCTATTTGAGACTCGTGGACTACCGTGCTCCCACATCTTTGGGGTCTTGA 495 0.4101 MENDGKESYKDGDQSEDLSVEYECSSNESDDMVDVTVDKAEADIINAGGLEKLITDLTIEDIWGLVFDTESQVCEFYAKYAKCYEFVSRKDLKTVDANGNINTRHLVCNKAGERYWKHLKRDNRQREHRAITRANCKVRIRFIRHYRTGYLRLVDYRAPTSLGS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1731 164 Pfam FAR1 DNA-binding domain 75 145 IPR004330 -
Amo01g1731 164 MobiDBLite consensus disorder prediction 1 30 - -
Amo01g1731 164 MobiDBLite consensus disorder prediction 1 17 - -
Amo01g1731 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 139 - -
Amo01g1731 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1731 Amo-Chr1 40868555 40870320 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1731 FAR1 8.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1731 - - adu:107485710 294.664