Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1715 ATGACACCGGAGGGTGCATATGATTATGTGAAGTCAATTCGACCAAGGGTGCTTTTGGCTTCATCTCAGTGGCAAGCTGTTCAGGATTACTACCGCTACCTCATGGGGAGAAGATTTGTTGGACATGCACCTTTTGCAGATCTATTTGTAAAGACTAAGGCTTCCGAGGCAGCAATAGCTTCAAGAAATCATATGATGTTTGACGATAATTCTGTAGTTGTGATAACTGAGTCAGATCTTGAAGGATATGATCCAAGCATTCAATTGCAAACTATGCCTAGTGAAATTTGGGCAGATTTAAGTGTGGTTTACCGTGTAGGGGTTGCTGGACGGGCAGCACTGGCAAGAATCTCATGCCTTTGGCTGCAGTGTGGTCCTAACCAGAAGATTTCTGCGGAGAAACTTACCAGTGATGACAGTTGCTCAATCCGGAGTAATAGCAATAACTTGGGAGGAATTAGTATCAATATCCATGTGTACTGA 483 0.4348 MTPEGAYDYVKSIRPRVLLASSQWQAVQDYYRYLMGRRFVGHAPFADLFVKTKASEAAIASRNHMMFDDNSVVVITESDLEGYDPSIQLQTMPSEIWADLSVVYRVGVAGRAALARISCLWLQCGPNQKISAEKLTSDDSCSIRSNSNNLGGISINIHVY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1715 160 PANTHER - 1 160 - -
Amo01g1715 160 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1715 Amo-Chr1 40041310 40045016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1715 1 160 Protein tyrosine phosphatase (PTP) family AT2G35680 44.118 1.32e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1715 - - adu:107485250 300.827