Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1691 ATGCAACTTCAGTTTATAGATGAGGAAGTTGTTTATCGATTCCACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGCTCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTATTGCCGGGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAGAATTTGCACGACATAGGCATCAAGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGCATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACCGTTGTTAGCCATTACAGGAACAATGAAAGAGTTGCAGAGTTCAATAGTAAATATACCGATCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTATGCTATGAATACAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTCAAGTGTAACAGTTTTGGAGTGCCAGAGATTGATCATGTGATTGAGTTTGACAAAGTTGGGGGGATGCTTCGTTGTGAGTGTCTGTGGTTTGAAAATAGAGGGATTCCCTACATGCACATATTCGCATGCCTAAAGCACCAACACATTGAAGTTATTCCAGAACACTTAGTGTGCAAGCATTGGACGAAGAATGCCAAGAGCGATTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATGTTGCAAGTAAGAACTCAAGTGATTTTGTCGAAGCAATGAATGATGTTGTCAACACAATTACAAAACTCCAAAAGCAAGGTGAAAATCCACGCAACRGTAATTTAGACGRTGACTACGTTGTTGACCCATTGGTGGTGAAGAGTAAGGGAGCTCCCAAGAAAAACTCAAAATTTAAGCAACGTAGAAGGTGTTCAAACTGCGGTGTGACAGGTCACTACAACAAAAGTTGTCCTAATGTTCTTGGTAGAATCCCAAAGGAGCCGGTAGACGATGATACAGAAAAGAATATCAGCAGCCATCTTGACATCCTCACTAAGATGCTGCATATCATCACATTCAATGGATGGCTCTCATGGCTTTCGATTCTATGGCCCCAAATACCAAACATCAGACAACAACTCAAGATATCATTAATTGCAGCAGATGCTTATGCGCGTCCGCGTGGATGGTCGAAAATGCTCAGGTGCTCGTCCGCGTCATGTGCGCGAACGCGTGGATGGTGTTCTGTTTTTCAAAAATTTTTTTCCAAAAAAAATTACCTCCCTCAACGCTTTCAAATCTCAACGGGAGAAGGTCTTCATGAAAGTTCAAGTGGACGAATTGACTTGAGCACAAGTCCTAGCCAACTCCCAAGAAAGACTACAACGGGCCGTGCGCGTACTATGCACGTGCGCGCCACCATACTTGTAGCAACTATGGCAATTCTTATATCGTTTCGAAGCCCCGGATGTTAG 1734 0.4331 MQLQFIDEEVVYRFHKTYAMMHGFAVRLDEVRRDSDGCVIMRQIVCNRALSRKEEVEKDERIRDHRPLTRSYCRARIRARLDRKIHKWKVVSFYEEHSHGLVDPLDVSMMPEYRTFSVSDKAQAKNLHDIGIKTCHILGYLAAQKAYVRKKDTLLEFINNMETVVSHYRNNERVAEFNSKYTDPVLVTSLPTLEDFAAKTFTRNMFREVRKEIEGAYAMNTELVIQDGGKLYFKCNSFGVPEIDHVIEFDKVGGMLRCECLWFENRGIPYMHIFACLKHQHIEVIPEHLVCKHWTKNAKSDFMKSNVDDPSDSDKVLKCRLGVLGAECSRLMDVASKNSSDFVEAMNDVVNTITKLQKQGENPRNXNLDXDYVVDPLVVKSKGAPKKNSKFKQRRRCSNCGVTGHYNKSCPNVLGRIPKEPVDDDTEKNISSHLDILTKMLHIITFNGWLSWLSILWPQIPNIRQQLKISLIAADAYARPRGWSKMLRCSSASCARTRGWCSVFQKFFSKKNYLPQRFQISTGEGLHESSSGRIDLSTSPSQLPRKTTTGRARTMHVRATILVATMAILISFRSPGC* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1691 577 MobiDBLite consensus disorder prediction 525 550 - -
Amo01g1691 577 SUPERFAMILY Retrovirus zinc finger-like domains 383 418 IPR036875 GO:0003676|GO:0008270
Amo01g1691 577 MobiDBLite consensus disorder prediction 525 549 - -
Amo01g1691 577 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Amo01g1691 577 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 109 IPR031052 GO:0006355
Amo01g1691 577 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 146 355 - -
Amo01g1691 577 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 5 109 - -
Amo01g1691 577 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 146 355 IPR031052 GO:0006355
Amo01g1691 577 ProSiteProfiles Zinc finger CCHC-type profile. 395 412 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1691 Amo-Chr1 39187174 39197501 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1691 FAR1 6.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1691 - - aip:107641230 545.814