Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1688 ATGAATGTTGACTCGGAACCACTCAGTTCACAAGACAACATCGAAGATTCCATGATGACTGGTGCAGAAGAAAATGTTAACTGCACTTGTGATTGCGGTGGCAACAGTAGTAAATGTGTGTCTGTGACGGCCGATGATATTATAAACCAGACCTTTGAATCATCGGATGCAGCTTATAACTTGTATGTACGTTATGCGAGGTGTCTCGGGTTTGGAATTTGCAAGGGTGATACAACACGTGGAAAAGATGGAACACAGCACAGAATGAGTCTGAGTAGGAAGAGGGAGCATAGAGCGCTGACTCGCACTGGCTGTAAAGCCATGCTTGCGGTGTATCTTGACACTAAAACTTTGACTTGGAGGGTTAAAAAATTAGTCGAGAAGCACAACCACGATCTTGTCCCACAATGCTTGGTACACCTTATTCCAAACCACCGAGGGTTGACTGAGCCACAAAAAGCTCAG 465 0.4495 MNVDSEPLSSQDNIEDSMMTGAEENVNCTCDCGGNSSKCVSVTADDIINQTFESSDAAYNLYVRYARCLGFGICKGDTTRGKDGTQHRMSLSRKREHRALTRTGCKAMLAVYLDTKTLTWRVKKLVEKHNHDLVPQCLVHLIPNHRGLTEPQKAQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1688 155 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
Amo01g1688 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 147 - -
Amo01g1688 155 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 3 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1688 Amo-Chr1 39140441 39140953 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1688 FAR1 1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1688 - - ahf:112715498 282.722