Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1687 ATGGACCATGCCAAGATTGCTTATGATTTAGTCATGGTGGCTCTATCCATATCTCTTATAGTTTTTGGTGTTGTTCTGTTTCTTGCATGCAAGAAAAAGCCGGTTGAATCCGAGGAAACACTTCCGGTAAAATTTTGTGCTCGTGCATACCCTTTAATGGAACTTGATGTTGCCATTGGTGGCTTCAACCATAGGAGAATTATTGGCCAGGGTCGCCTAGGAACGGTTTACGCTGCAACGCTATCGAATGCAGAGCTTGTAGCTGTGAAGATGATCCACCTTTTTCTTGTTTTGAGCAATGCAGGCTTTGGATTCTCATCTGTGTTGAAGTGGCTCTCATTGGCACAACACCCCAACGTTGTTCCAATCATAAGATTCTCCGAAGCACCACGGGAAAGAGTTGTAGTCATGGAGTTTATCCGATTTTACACTAGCACCTTGCTTGACTTTGTAATAGCTTTACCACTTTCTATCGAAACAACAGAAACAAAGAGCTTCCCATCCCTTGGGTACCTACAAACAAGAGAATCAGCATTTGTTATTATTAACAGAACCATCTATTTTCTTTATTTTCCCGCACACTGA 585 0.4205 MDHAKIAYDLVMVALSISLIVFGVVLFLACKKKPVESEETLPVKFCARAYPLMELDVAIGGFNHRRIIGQGRLGTVYAATLSNAELVAVKMIHLFLVLSNAGFGFSSVLKWLSLAQHPNVVPIIRFSEAPRERVVVMEFIRFYTSTLLDFVIALPLSIETTETKSFPSLGYLQTRESAFVIINRTIYFLYFPAH* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1687 194 Pfam Protein tyrosine and serine/threonine kinase 65 142 IPR001245 GO:0004672|GO:0006468
Amo01g1687 194 ProSiteProfiles Protein kinase domain profile. 62 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1687 194 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 141 - -
Amo01g1687 194 Gene3D Phosphorylase Kinase; domain 1 27 139 - -
Amo01g1687 194 SUPERFAMILY Protein kinase-like (PK-like) 39 142 IPR011009 -
Amo01g1687 194 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Amo01g1687 194 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 3 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1687 Amo-Chr1 39137613 39138197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1687 45 140 Strubbelig Receptor Gene Family AT4G22130 30.208 1.13e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo01g1687 PK_Tyr_Ser-Thr 2.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1687 - - adu:107468261 238.424