Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1671 ATGCCAAGGCTTTGTTGGACTCCTAATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGGAGGTCAAGAAAGAGCAACACCTAAATTGGTGCTTCAGCTAAGGAATGTCAGAGGCCTAAGCATGGTTCATGTCAAGAGTCACTTGCAGGTAGCTATTAGATTCTACTCCTTAATTATCTTATATTTTGAGATATGA 201 0.4129 MPRLCWTPNLHLSFVHAVQRLGGQERATPKLVLQLRNVRGLSMVHVKSHLQVAIRFYSLIILYFEI* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1671 66 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 51 IPR044848 GO:0003700
Amo01g1671 66 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 2 52 IPR006447 GO:0003677
Amo01g1671 66 SUPERFAMILY Homeodomain-like 2 52 IPR009057 -
Amo01g1671 66 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 1 51 - -
Amo01g1671 66 Pfam Myb-like DNA-binding domain 4 52 IPR001005 -
Amo01g1671 66 Gene3D - 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1671 Amo-Chr1 38679716 38680156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1671 1 52 G2-like Transcription Factor Family AT2G42660 75.000 2.17e-24 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo01g1671 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1671 - - aip:107618142 97.8265