Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1653 ATGAGGATCCCAATCTACCATCCCATGAAACTTACCGGGTATGTTATGGATGTAAAATTTGTCCTAAAGGTAAGGATGATTTTCAAGACACTAGGAGAAGCTGGAAAGTTCTACAAACATTATTCCAAACTTGCTGGTTTTTCTACAAAAATAAGGAACACGATTTGGAAGGGAGACGAGGTTAAGAATCAACTAATTGTATGCAGCAGAGAGGGGAGGTGGAAATCCAAGATATCTCTAACTTTGAAAACAAACCCCTCAGTTGGGTTAAACTGTCCAGTTAAGATTTATGTACATATAATGAACGATGTTAGTCTCTGGACAATTTCTAAAATCGTTCTGAATCACTCACATCCCTGCTGTCCAAACCGGGCAGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTCGTGCGTCGCACCATTGAAACCAACGAGGAAGCCAAAATCAGACCGAGCAAAACTTACCAATCATTTGTAACACAATACAATAATTGCCTAGCAAGCAGAGAGAAAAGAAAGAGAGAATTTGACGCTACAGATTTTCACACCATGATACCGTGCGCAATAAAATCAGTAATAGAGGCCCAGTTTCAGCACGTGTATACCCACGAGAAGTTCAGGGAAGTTCAAGCACAATTCAGAGGTAAAGTGAACTGCATCACAAGATCAATGCATTCCACCCTAGGTTTCACAACATACGAAGTCATAGAGCTAGTTTTCAACTCCAAATTCAACATGTTTTTCTGCCTGGTGTTTGAGTCAAGGGGCATACTGTGCCACCATTCCCTGAGCGTCCTAAGCTTCGAGCGAGTGAATAACAGCAAGAACATAAAGAGGAGGCACACACACATCAAGAGCAACCAAGACGAGCCTCTACTAGAGTCGAGAAGCAAGAGATTCGACGATTTGGTATTTCGGTCACACAATATTTACAAATTTACATCTGAGTCCGAGGAGCTGACTGGAATTCTGCACCGAATTTCAAACACCACGAAAAAAAAGAAAAAGACAGCTCCAAGCGAGTTGAACATTTTAGACGGCGGATCACACATTCAGTCAAGCTATAGCCTTTACAATTCACCAGATATGAATTATCCCAGAGAGGATTATACGAGTTTTAGTTTATATTAA 1134 0.4109 MRIPIYHPMKLTGYVMDVKFVLKVRMIFKTLGEAGKFYKHYSKLAGFSTKIRNTIWKGDEVKNQLIVCSREGRWKSKISLTLKTNPSVGLNCPVKIYVHIMNDVSLWTISKIVLNHSHPCCPNRAEMLKQHRELSMFVRRTIETNEEAKIRPSKTYQSFVTQYNNCLASREKRKREFDATDFHTMIPCAIKSVIEAQFQHVYTHEKFREVQAQFRGKVNCITRSMHSTLGFTTYEVIELVFNSKFNMFFCLVFESRGILCHHSLSVLSFERVNNSKNIKRRHTHIKSNQDEPLLESRSKRFDDLVFRSHNIYKFTSESEELTGILHRISNTTKKKKKTAPSELNILDGGSHIQSSYSLYNSPDMNYPREDYTSFSLY* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1653 377 Pfam FAR1 DNA-binding domain 36 121 IPR004330 -
Amo01g1653 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 147 335 IPR031052 GO:0006355
Amo01g1653 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 133 IPR031052 GO:0006355
Amo01g1653 377 PANTHER OS03G0843700 PROTEIN 147 335 - -
Amo01g1653 377 PANTHER OS03G0843700 PROTEIN 22 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1653 Amo-Chr1 37878260 37881956 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1653 FAR1 2.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1653 - - adu:107484182 350.517