Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1642 ATGTCGGGGCAAACACAGCGTCTGAATGTTGTCCCCACGGTGACGATGCTGGGAGTGGTGAAGGCTCGTTTGGTTGGAGCCACACGTGGTCACGCGCTCCTAAAGAAGAAGAGTGATGCACTTACTGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTCTACCAAGGAATCAATGGGTGACATCATGAAGACCTCTTCTTTTGCACTGACCGAGGCAAAGTACGTTGCTGGTGACAACATCAAGCATGTTGTGCTCGAGAATGTTCGAGAGGCCTCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGCGTTAAGCTTCCCAAGTTCGAGTACACCAATGACGGCGAGGTTAACAAGAATGACCTGACTGGATTGGCCCGGGGTGGACAGCAGGTGCAGCAGTGCCGAGCTGCTTACATCAAGGCAATTGAGGTCCTTGTGGAGCTTGCCTCTCTTCAGACATCCTTCCTCACACTTGACGAGGCAATCAAGACTACAAATCGGAGGGTTAATGCCCTTGAGAATGTGGTGAAGCCTAGGTTGGAGAATACCATTAGTTATATTAAGGGAGAGTTGGATGAGCTAGAAAGGGAGGATTTCTTTAGGTTGAAGAAGATCCAAGGATATAAGAAGAGGGAAATCGAGAAGCAGATGCAATCTGCCAAGATGTTCGCTGAGGAACAGGTTGCTGAGAAGCTTGCATTGCAAAGAGGTATTTCGCTGAATAATGCTCAAAACATTTTGTCTGCAGCGGCACAGAAAGATGAGGATATCATTTTCTGA 789 0.488 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVNKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQSAKMFAEEQVAEKLALQRGISLNNAQNILSAAAQKDEDIIF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1642 262 Gene3D - 1 199 - -
Amo01g1642 262 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 262 - -
Amo01g1642 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
Amo01g1642 262 Coils Coil 180 200 - -
Amo01g1642 262 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 213 IPR002699 GO:0046961
Amo01g1642 262 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1642 Amo-Chr1 37174679 37175467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1642 1 262 Primary Pumps ATPases(2) AT3G58730 81.298 1.47e-158 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1642 K02149 - tcc:18612121 450.669