Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1598 ATGACAGCTCTTTCCAACGGCCACGCCGCTAATAACTCTTCTCTTTTCAAGATCCCACCCATCAAGTTCACCAATCTCTTCATCAATGGCCACTTTGTTCATTCTCTCTCAGGAAACGAGTTTGAGACAATAGATCCGAGAACAGGAGAGGTGATAGCGAAAATCTCGGAGGGAAGAAAAGAAGACATTGATGTGGCTGTTAAAGCGGCACGTGAGGCATTTGACAACGGTCCATGGCCACGCATGTCTGGTGCGGAAAGAGCAAAAATCATGATGAAATGGGCAGATCTTATTGAAGAAAACTTAGAAGAACTAGCGGCATTAGACGCCATTGATGCTGGAAAGTTGTACCACTTAGTTAAGGTCGTGGACATCCCTGCAGTTGCAAATTGTTTACGCTACTATGCCGGTGCTGCCGATAAGATCCATGGCGAGGTGCTAAAAGGTGCTAGAGAGTTCCATGCATATACTTTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCTTGGAATTTCCCTAGCACCATGTTTGCTGCCAAGGTTAGTCCTTCCTTGGCTGCCGGTTGCACCGTCGTCCTTAAGCCGGCCGAACAAACACCTCTCTCGGCTCTGTTTTTCGCGCATTTAGCTAAACAGGCTGGAATTCCGGATGGAGTTCTTAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGCTTCACCGGTTCAACAGAAGTAGGCCGTGCCATAATGCACGCGGCGGCTAGCAGCAATCTGAAACCGGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTGATCTTGCTCTCTTGGGAATCTTATTTAATAAGGGAGAAATTTGTGTTGCAAGTTCAAGGGTGTTTGTTCAGGAAGGGATATACGATGAGTTTGAGAAGAAGTTGGTTGAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTCAATCTCAGCAAGGCCCTCAGGTTGACAAGAACCAATTTGAGAAAATCCTTTCATATATAGAGATTGGAAAGCAAGAAGGAGCAACCCTATTAACAGGTGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCTAATGTCAAGGAAAACATGCGTATAGCACAGGATGAAATATTTGGCCCTGTCTTGGCACTGATGAAGTTCAGGACGATTGAGGAAGGAATTAAGAGTGCTAACAACAGCAGATATGGTCTAGCAGCAGGAATAGTGACGAAGAACATAGACACAGCAAACACAGTGTCAAGAGCCATTCGTGCAGGCATTATTTGGATCAATTGCTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGGTATAAGCAGAGTGGGTTTGGAAGAGATTTTGGAATGGAGGGTCTACATAAGTACCTACAAGTTAAATCTGTTGTCACTCCCATATACAATTCTCCTTGGCTTTGA 1515 0.4455 MTALSNGHAANNSSLFKIPPIKFTNLFINGHFVHSLSGNEFETIDPRTGEVIAKISEGRKEDIDVAVKAAREAFDNGPWPRMSGAERAKIMMKWADLIEENLEELAALDAIDAGKLYHLVKVVDIPAVANCLRYYAGAADKIHGEVLKGAREFHAYTLMEPIGVVGHIIPWNFPSTMFAAKVSPSLAAGCTVVLKPAEQTPLSALFFAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRAIMHAAASSNLKPVSLELGGKSPLLIFDDADVDKAADLALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPQSQQGPQVDKNQFEKILSYIEIGKQEGATLLTGGKRVGNKGYYIEPTIFSNVKENMRIAQDEIFGPVLALMKFRTIEEGIKSANNSRYGLAAGIVTKNIDTANTVSRAIRAGIIWINCYFAFGNDIPYGGYKQSGFGRDFGMEGLHKYLQVKSVVTPIYNSPWL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1598 504 SUPERFAMILY ALDH-like 17 500 IPR016161 GO:0016491
Amo01g1598 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Amo01g1598 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Amo01g1598 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
Amo01g1598 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Amo01g1598 504 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 504 - -
Amo01g1598 504 Pfam Aldehyde dehydrogenase family 37 494 IPR015590 GO:0016491
Amo01g1598 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1598 Amo-Chr1 34871118 34881037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1598 4 504 Aldehyde Dehydrogenase Gene Family AT3G24503 71.514 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1598 K12355 - gmx:100783920 855.899