Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1569 TATGCTGGTTCCATCTATGGACACTACGATGATGGTGTCCCCAATAGAGACGAGCAAGCCAAACATGAAGAAGATTGTCAATTGATTTCTCAAAACATAGAAAAAACCCAAATTGCACAACACAATTCTACATTAATTACTTTTTCCAGCAAAAAAATACCAAAATTAGGCATGGAATTTGACACGGTACTAGAAGCTAAAGACTTCTGGAAAAGTTATGGTGGAATGATGGGTTTTGATATTCGACAATTGTATGCAAATAAATGCAAGCTTGATAATTCTGTAAGTAGTTTTAGACTTGTTTGTGCAAAGGAAGGCCAACGAAAACCAGATAAACGGGATCATTTAACAAAGCAACCTCGCGCCGAGACTAGAACAAGTTGCCAAGTAAGAATGTTACTCAAGTTTGCTCGAGATATAAAAAAAATATGTGATTTTCATATGATGCCATCACAAAGAAAGATTTCAGAAGTACAAGCATTGCAAATAGATTTGGCAGATGAAGCTGGCATAAGACCAAAGGAAACACATGAACTAACAAGTTTACAAGCTGGTGGTAAAGATGTCCTTTGA 573 0.363 YAGSIYGHYDDGVPNRDEQAKHEEDCQLISQNIEKTQIAQHNSTLITFSSKKIPKLGMEFDTVLEAKDFWKSYGGMMGFDIRQLYANKCKLDNSVSSFRLVCAKEGQRKPDKRDHLTKQPRAETRTSCQVRMLLKFARDIKKICDFHMMPSQRKISEVQALQIDLADEAGIRPKETHELTSLQAGGKDVL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1569 190 MobiDBLite consensus disorder prediction 1 20 - -
Amo01g1569 190 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 135 - -
Amo01g1569 190 Pfam FAR1 DNA-binding domain 68 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1569 Amo-Chr1 33277330 33278229 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1569 FAR1 6.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1569 - - aip:107620925 303.908