Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1484 ATGCTAAGTAAGACTCTTTCTTTTGCCACTGCAATGGGCTGCTGTAATTGCTTCGGCTTCATAAGGAGTCAAAGCCGACAGAGAGCTAAGCCCCGCCATGTYAACCRTAATCCCTCCCAGGAGCGGTTGTTGGATGATGACATGGATGACATGGATGACGATGATGAGCTGATGTATGGTGACAATGTTGCTAACTCCAGTAGTGGAGATGATAGTGATGGGCAAATTCGCCCCAAGCGATCCGAGGATATTTTGAACTTCAGAGCAGAGAATGACTTGGTTTGTAGGAAGTTTCCTGTTAAGGAGACTCACAAAGTTATTCGATCAGAGGATGACAATGGGACCAAGATGATTAATCAGTATGTTCGTGAATATAAGATCGGTTCTGGTAGCTATGGGAAAGTGGCGCTTTATCGAAACTCCATTGATGGAAAGCATTATGCAATTAAGTCCTTTCACAAGTCTCATCTACTGAAGCTTCGAGTTGCACCCTCTGAGACAGCCATGTCTGATGTTCTACGTGAGGTACAAATTATGAAAATGCTAGGGCATCCTAATATAGTCAATCTTATTGAGGTGATTGATGATCCTGAGTCAGATCACTTCTACATGGTACTTGAATATGTGGAAGGCAAGTGGGTTTGTGAGGGTACAGGCCGTGCTTGTGCCTTAGGTGATGAGACTGCTAGGAGATACTTGCGAGATATAGTTTCTGGATTGTCATATCTCCATGCTCATAACATAGTACACGGGGATATTAAACCTGATAATCTGCTGATTACACGTCATGGAACAGTAAAAATAGGGGATTTCAGTGTCAGCCAGGCTGTTGAGGATGATAATGATGAGCTTCGCCGTTCACCTGGCACTCCCGTCTTTACAGCACCAGAATGTATTCTAGGCCTTACCTATCATGGCAAAGCAGCTGACACATGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCCTTCCTTGGGGACACACTTCAAGATACATATGACAGACAGAGAATGACTTGGTTTGTAGGAAGTTTCCTGTTAAGGAGACTCACAAAGTTATTCGATCAGAGGTAA 1086 0.4355 MLSKTLSFATAMGCCNCFGFIRSQSRQRAKPRHVNXNPSQERLLDDDMDDMDDDDELMYGDNVANSSSGDDSDGQIRPKRSEDILNFRAENDLVCRKFPVKETHKVIRSEDDNGTKMINQYVREYKIGSGSYGKVALYRNSIDGKHYAIKSFHKSHLLKLRVAPSETAMSDVLREVQIMKMLGHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGRACALGDETARRYLRDIVSGLSYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAVEDDNDELRRSPGTPVFTAPECILGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDRQRMTWFVGSFLLRRLTKLFDQR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1484 361 SUPERFAMILY Protein kinase-like (PK-like) 114 343 IPR011009 -
Amo01g1484 361 MobiDBLite consensus disorder prediction 45 59 - -
Amo01g1484 361 Pfam Protein kinase domain 121 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1484 361 MobiDBLite consensus disorder prediction 29 81 - -
Amo01g1484 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Amo01g1484 361 SMART serkin_6 121 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1484 361 ProSiteProfiles Protein kinase domain profile. 121 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1484 361 CDD STKc_LKB1_CaMKK 127 339 - -
Amo01g1484 361 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 339 - -
Amo01g1484 361 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Amo01g1484 361 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 339 - -
Amo01g1484 361 Gene3D Transferase(Phosphotransferase) domain 1 220 356 - -
Amo01g1484 361 Gene3D Phosphorylase Kinase; domain 1 115 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1484 Amo-Chr1 30488674 30493008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1484 116 354 CBL-interacting serine-threonine protein kinases AT5G35410 33.198 4.76e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Amo01g1484 Pkinase 3.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1484 K00908 - gmx:100789178 523.087