LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo01g1439	GGAGTAAGTGCTGCTCATTTTCTAAGTCAAGTTACTGTAAATGGAGGAGCAACTTCTGGGTATTATTTTGCTTCTGGTGATTTTCCAGTTCTATTGAGCATCACATTGCTACTGGATATGCCTCTAGGAATTGGGGATTTTAGCTTCAGAACAATCCACCTGAATTGCATTTTCTTGCAGGATCAACGTTGGAAGCTCTTACAAGGATTTCTCATCCTTCTCCTCTTTAATTCTCTTCTCTCCTTAGTCTGGGAAGCTATAGCCAATGTTATTGTTTCTGGGTTTAGTGGCCAACTGAAAGGATGGTGGGATAACTACCTTTCTGATAACCAAAAACACTCAATCTTTTCTGCCATAAAAGTCAACAACCAGAACGAACCCATCATTGGTGACGACGGGGAACCTATCCCCGATGCTGTCAATACCTTAATCTTTACCATAGCAAGCCCCTTCATTGGTGATCCATCTCTTTGGAAAGACCATTCTGCGGAGCTGCTTTCCAATCTCAGATGCAAAACTTTGTCTGACTTTCGATGGTATAAAGATACCTTTCTTACTAGGGTTTATACCAGAGAAGACAGTCAACAACCTTTCTGGAAAGAAAAATTCCTTGCTGGACTCCCCAAATCCCTTGGAGATAAAGTAAGGGACAAAATTCGTAGCTTAACCCCAGATGGGATAATACCCTATGATGAGTTAAGTTATGGCCAACTCATTTCTTTCATCCAAAAGGTTGCCCTAAAGATTTGTCAAGATGATAAAACCCAAAGGCAACTTGCTCGTGAGAAAACTCAAAATCGTATCGATTTGGAAACTTTCTGTGAACAATTTGGTCTTCCTGCTTGTCATCCYAGGAAATCTAAAAGACCTTCCAACCGAAAAGTTTTTAAATCTAACCCTGAAAAGAATTTTAGAAGATTCAAAAAGGGTTTTCAAAAACCTAAAAATGAAACAGGTTTCCAAAAGAATTTCCAAAAGTATCCCCAAAAAAACCCCATTCTCTCACAATTAGTACAAGAAGAAGAATCTGGTGATAAGGATCTTGGTTCTCTTTTAAACCAAACTGAGTGCTCTAAGGAACAAGAAAATAAAATTTCTAACGACAATGAGGTAAAAGAAATTTTGAGAATAATAAATGTATTCTCCTTCATGAAACATCGTGCAGATTCAAACTGTATTAAGGAAGGTCTGGTCCCCACAAAATATTTTGAAAAAACTACTGAACGCCTTAGCTCAATAACGGGTGAAAGGCTAAGTATCAATTTTAAAATAACCAATATCTTTATTGAAAAGGGAAATATCAGAATTCCCACCGATTTCATCATAGCAAAAGATATAAAAAATGATGTAGTTTTGGGGACACCTTTCATAAATCTATTGTTTCCATATCTGGCAYATTTTCCTGGACTTACCTCTTTTGTAGGAGGACAAATAACTTTCTTTGAGTTCCTAGACTCACCAAAGRAAAYYTCTCTAAACCTAATTYAATDKAAAACCAAACAGATTTYTTTTCTAAAAGAAGAAATCTCTTTCAAAACCCTTYAATCACAGCTTTCTCAACCAAAGATTCAAGAAAAAATAAAAAATCTTTTAACTCAAATTGAAAAATCTATTTGTTCTGATTTGCCTCATGCCTTCTGGATAGGAAAGAACACATTTTGTAAGGACATCCCTTGCAATGTGTTGTTCCTTGAAGATGTCTTAGCAAACTTTGACAATGATCTTGGAATCCCTTTCAGCCCTGTGCTTAACGATGCCATTCGATTTAGCTACGTGGCGCACGTCATGCTTGTTTTTCCAGTTGTCTTCTATCCCCTGCGAATCAACTTAGATGGCCACATATTTTCATCTTCTTCAAGGACTTTGCTTCAAGATAACTTGAGATTCACGTCACTAACCTTATCTCTTATTTTTCTAATATTTTCAAATTAA	1932	0.3649	GVSAAHFLSQVTVNGGATSGYYFASGDFPVLLSITLLLDMPLGIGDFSFRTIHLNCIFLQDQRWKLLQGFLILLLFNSLLSLVWEAIANVIVSGFSGQLKGWWDNYLSDNQKHSIFSAIKVNNQNEPIIGDDGEPIPDAVNTLIFTIASPFIGDPSLWKDHSAELLSNLRCKTLSDFRWYKDTFLTRVYTREDSQQPFWKEKFLAGLPKSLGDKVRDKIRSLTPDGIIPYDELSYGQLISFIQKVALKICQDDKTQRQLAREKTQNRIDLETFCEQFGLPACHPRKSKRPSNRKVFKSNPEKNFRRFKKGFQKPKNETGFQKNFQKYPQKNPILSQLVQEEESGDKDLGSLLNQTECSKEQENKISNDNEVKEILRIINVFSFMKHRADSNCIKEGLVPTKYFEKTTERLSSITGERLSINFKITNIFIEKGNIRIPTDFIIAKDIKNDVVLGTPFINLLFPYLAXFPGLTSFVGGQITFFEFLDSPKXXSLNLIXXKTKQIXFLKEEISFKTLXSQLSQPKIQEKIKNLLTQIEKSICSDLPHAFWIGKNTFCKDIPCNVLFLEDVLANFDNDLGIPFSPVLNDAIRFSYVAHVMLVFPVVFYPLRINLDGHIFSSSSRTLLQDNLRFTSLTLSLIFLIFSN*	644

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo01g1439	643	PANTHER	-	85	404	-	-
	Amo01g1439	643	PANTHER	-	85	404	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo01g1439	Amo-Chr1	27849843	27917315	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo01g1439	564	641	Amino Acid or Auxin Permease AAAP Family	AT5G38820	67.089	9.68e-25	105

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo01g1439	-		-	adu:107474791	418.313