Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1426 ATGGAATCGTCATCACCTAGCTGGTTACATGATCTGCAGGAAATGGAAGATGATTACAACAATTTCTTTCCGAAAGAGTACAGGATGAACAACTCGATTGATGATTATGATGAAGATTTATTTTTCGCACATGACATGGGGAATTCAATAATGTTCGAGTCACCAAGCAATAATAATAATTACTCTTCCGTTGATGAAACTAGTTTTGATGATGAGAGGCCTTCTAAGTTTCTCAAAACAAGTACCAATACTGATAATAATTCTTATTATTCATCATTATCACCAAATTTTTCTTCCCTCTCATCATCATCAATAACATCATTTCAGCCACAAATTCTGTGCTTTGACAACTCAAACTCCTCTCTCAATAATAATGATAATACCACCCAGCTTTATGATTTAGATTATACAACCTTGAACACAGAGACAAAACTAAAAGAGGTGGAAAATGGGTCATCAAAAAATCAAAACCTGTTAATAACTAATATACGTATTTTGACAATACAGATAGACAAAGTTACTGTGTTAGAGAATGCAATCAAGTACGTGAAGGATCTCAAAATTCGTCTTACAACACTAGAACAAGAAAATAATGAAAAAATAAAGGAAATAGTAGAAGAGCCTTCTGTGATTGTTCTTAACAAAAGGTCGCCACATGATAATGAGAGTGACGATGAGAGCGTTATTGTTGATGATGCTTCTAATCATGATTCTTCTTCACTTCTCCATCAAGTGGAAGCAAGAGTATCAGGGCAACAGGTTTTGATTCGGATTCATTGTCAAAAGCATAAGGGTATTTTGGTTAAATTACTTTCTGAGATTCAAGGACATAACCTACTTGTTTTGAATAGCAGTGCGTTGCCTTTTGGAGATTCGATTCTTGATATAACTGTCATTACCCGGATGGGCGAAGGGTACAATTTGACCGTTAAGGAACTTGTCAAGAGCATACGCGTGGAAACATTGAAGTTCATCTTGTCATAA 984 0.3516 MESSSPSWLHDLQEMEDDYNNFFPKEYRMNNSIDDYDEDLFFAHDMGNSIMFESPSNNNNYSSVDETSFDDERPSKFLKTSTNTDNNSYYSSLSPNFSSLSSSSITSFQPQILCFDNSNSSLNNNDNTTQLYDLDYTTLNTETKLKEVENGSSKNQNLLITNIRILTIQIDKVTVLENAIKYVKDLKIRLTTLEQENNEKIKEIVEEPSVIVLNKRSPHDNESDDESVIVDDASNHDSSSLLHQVEARVSGQQVLIRIHCQKHKGILVKLLSEIQGHNLLVLNSSALPFGDSILDITVITRMGEGYNLTVKELVKSIRVETLKFILS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1426 327 Coils Coil 176 203 - -
Amo01g1426 327 PANTHER BHLH TRANSCRIPTION FACTOR 169 325 - -
Amo01g1426 327 MobiDBLite consensus disorder prediction 53 81 - -
Amo01g1426 327 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 169 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1426 Amo-Chr1 27199857 27211923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1426 169 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 39.264 2.84e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1426 - - ahf:112720570 471.085