Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1425 ATGGAATCGTCATCACCTAGCTGGTTACATGATCTGGAAATGGAAGATGATTACAACAATTTCTTTCCGAAAGAGTACAGGATGAACAACTCGATTGATGATTATGATGAAGATTTATTTTTCGCACATGACATGGGGAATTCAATAATGTTCGAGTCACCAAGCAATAATAATAATTACTCTTCCGTTGATGAAACTAGTTTTGATGATGAGAGGCCTTCTAAGTTTCTCAAAACAAGTACCAATACTGATAATAATTCTTATTATTCATCATTATCACCAAATTTTTCTTCCCTCTCATCATCATCAATAACATCATTTCAGCCACAAATTCTGTACAAAGTTACTGTGTTAGAGAATGCAATCAAGTACGTGAAGGATCTCAAAATTCGTCTTACAACACTAGAACAAGAAAATAATGAAAAAATAAAGGAAATAGTAGAAGAGCCTTCTGTGATTGTTCTTAACAAAAGGTCACCACATGATAATGAGAGTGACGATGAGAGCGTTATTGTTGATAATACTTCTAATCATGATTCTTCTTCACTTCTCCATCATGTGGAAGCAAGAGTATCAGGGCAACATGTTTTGATTCGGATTCAGTGTCAAAAGCATAAGGGTATTTTGGTCAAATTACTTTCTGAGATTCAAGGACATAACCTGCTTGTTTTAAATAGTAGTGCGTTGCCTTTTGGAGATTCGGTTCTTGATATAACTATCATTACTCGGATGGGCGAAGGGTACAATTTGACCGTTAAGGAACTTGTCAAGAGCATACGCGTGGAAACATTGAAGTTCATCTTGTCATAA 810 0.3531 MESSSPSWLHDLEMEDDYNNFFPKEYRMNNSIDDYDEDLFFAHDMGNSIMFESPSNNNNYSSVDETSFDDERPSKFLKTSTNTDNNSYYSSLSPNFSSLSSSSITSFQPQILYKVTVLENAIKYVKDLKIRLTTLEQENNEKIKEIVEEPSVIVLNKRSPHDNESDDESVIVDNTSNHDSSSLLHHVEARVSGQHVLIRIQCQKHKGILVKLLSEIQGHNLLVLNSSALPFGDSVLDITIITRMGEGYNLTVKELVKSIRVETLKFILS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1425 269 PANTHER BHLH TRANSCRIPTION FACTOR 114 267 - -
Amo01g1425 269 Coils Coil 118 145 - -
Amo01g1425 269 MobiDBLite consensus disorder prediction 53 80 - -
Amo01g1425 269 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 114 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1425 Amo-Chr1 26895404 26903567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1425 114 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 38.750 1.91e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1425 - - ahf:112720570 230.335