Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1393 ATGATGGAGAGAGACAGAGAAGAGAGTGTTGATTTGGCACAAATCTCTCTTCGACCCCTTCAGCTCTCTGATGTTGATGATCTCATGGTGTGGACCACTGATGAAAAAGTACCCAAGTTTTGCACTTGGGAACCTTACAGCAGCAAAGACCAGGGCATTGACTTCATTCAAAATAAAGCATGCGAGTTTCTATGGAGCAGAGCAATATGCCTTAATGACAGTGCTATTGGTTTTATCTCCATGACCTCGTCTTCTGTTACTGATAAATCAAGGGGGAAATCAGTGGAACTTGGATATGTTCTAGGTTCCAAATACTGGTCCAAAGGGATTATGACTTATGTTGTAAAACAAGTGAAGAAGGTTGCATTCAGAGAGTTTCCACACTTAGAGAGGCTTGAAGCTCTAGTTGATGCAGAAAATGTGGGGTCTCAGAGGGTGCTGGAAAAGGCTGGTTTTCATAGGGAGGGAGTCCTAAGGAAATACTTGTTCTTTAAGGGAAAAAGCAGAGACATGGTCATTTTCAGTGTTTTATCAACCGATCTTAATCACCAAGATTGA 558 0.4194 MMERDREESVDLAQISLRPLQLSDVDDLMVWTTDEKVPKFCTWEPYSSKDQGIDFIQNKACEFLWSRAICLNDSAIGFISMTSSSVTDKSRGKSVELGYVLGSKYWSKGIMTYVVKQVKKVAFREFPHLERLEALVDAENVGSQRVLEKAGFHREGVLRKYLFFKGKSRDMVIFSVLSTDLNHQD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1393 185 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 9 181 - -
Amo01g1393 185 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 177 IPR016181 -
Amo01g1393 185 Pfam Acetyltransferase (GNAT) domain 16 153 IPR000182 GO:0016407
Amo01g1393 185 Gene3D - 3 182 - -
Amo01g1393 185 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 181 - -
Amo01g1393 185 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 15 170 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1393 Amo-Chr1 25026739 25027843 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo01g1393 Acetyltransf_3 1.6e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1393 - - ccaj:109810875 265.774