Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1391 ATGTCGATTTCTTTCAAAATGATGCAATGGGAAATGCCACAACGAACTAGAACACAGAGCAGTGGACAAGCATTGAGTGTGTCATCCTCTGATGGCACGGATGAAGATGAGATCCAACACCATAACCTTCGTCCTCATCATTACTTTGAGTTTTCTTCTTCGAAGCCTTGGAATGGAGGCGCCAACAACAACAACAACAACAACAATGTTATGGGCGCAACGGTGGTTATTCCTCCTGCAACCAGCGTCCATGAGTTGCTTGAATGTCCCGTTTGCACCAATTCAATGTATCCCCCAATTCATCAGGGTTATGGTTACATTGAGAAAGTGTTGTGTATAGAAGGGCATGTTTGA 354 0.4407 MSISFKMMQWEMPQRTRTQSSGQALSVSSSDGTDEDEIQHHNLRPHHYFEFSSSKPWNGGANNNNNNNNVMGATVVIPPATSVHELLECPVCTNSMYPPIHQGYGYIEKVLCIEGHV* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1391 117 MobiDBLite consensus disorder prediction 13 32 - -
Amo01g1391 117 MobiDBLite consensus disorder prediction 13 40 - -
Amo01g1391 117 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 27 104 - -
Amo01g1391 117 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 27 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1391 Amo-Chr1 24999098 25000322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1391 83 102 C3H Transcription Factor Family AT2G41980 90.000 6.04e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1391 K04506 - pop:7496400 103.99