Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1335 AAGACTCTCTCAGTCGCCATGTCTGTCTCCCCAAAACACTCAGCTTGTACTCTTCTTGACTTGCACTGCAATGAAGCAACAAGCGATGTAGTGTACTTGGATTCCAACATTCACAGCAACTATGAATTCGACGATGCTGGTTCGAACAATGCTCTTCTATGGAGCGACTCTGGTAGTGTCGATGAAGAAGACCGTCTCTTGAGCTTGTTAGACTCTGAACTTGATCAAGTTCAGGAAAGAACAAGGTCTCTAATACAACTTCGCAAGACTAAGTGGTTGCGCAATGCGCGAGAAGAAGCCATAAATTGGATCCTAAAGGTATGTGCATACTACAGTTTTAGACCTGAGACGGCATATCTTTCTGCAATTTATCTTGATCGTTTCCTTTTGTCGCACACATTGAAGCAAGATAAAACATGGCCTCTGCAGCTGCTATCAGTTGCATGCCTTTCGCTTGCAGCGAAAATGGAAGAAACCAAGGTGCCTCTGCTATTGGACCTACAAATGGTTGAGCCAAGGTTCTTGTTTAAGCCGAAAACAGTTCAGAGGATGGAGCTTCTGGTTATGGCAACTCTCAAGTGGCAACTCCGAGTTATAACAAAGCCTTTCGATTTTGCTCATCTTTTCATTCTTAGACTTTCTTGTTCTTCAGCTTCCACATTAGGCGATTTAAATTATCTTGCTTCTCGTGTGTCTGATGTTATCTTTAAAACATGTTTAGTTATGGATTTCTTGGAGTTTTCACCTTCCACAATAGCAGCAGCGGCTCTGTTATATGTAACAGATCAATATGTTGATGACCTTAAACTATATGGCTTCCACAAGAATATAAGAATTGATATGGTGCAGAAATGTCACAACCTTATGAAGCAGACAATTCAGAGGTCGGAATATATTTTGCCCAAGACTACTCTTCAGTTAATGCCCCGAAGTCCAACTTGTGTGCTTGATCTTGCAGATATGCAAGATAATCATAGTGCTACTCACAAATGA 993 0.4139 KTLSVAMSVSPKHSACTLLDLHCNEATSDVVYLDSNIHSNYEFDDAGSNNALLWSDSGSVDEEDRLLSLLDSELDQVQERTRSLIQLRKTKWLRNAREEAINWILKVCAYYSFRPETAYLSAIYLDRFLLSHTLKQDKTWPLQLLSVACLSLAAKMEETKVPLLLDLQMVEPRFLFKPKTVQRMELLVMATLKWQLRVITKPFDFAHLFILRLSCSSASTLGDLNYLASRVSDVIFKTCLVMDFLEFSPSTIAAAALLYVTDQYVDDLKLYGFHKNIRIDMVQKCHNLMKQTIQRSEYILPKTTLQLMPRSPTCVLDLADMQDNHSATHK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1335 330 Pfam Cyclin, N-terminal domain 81 196 IPR006671 -
Amo01g1335 330 Gene3D - 198 264 - -
Amo01g1335 330 SUPERFAMILY Cyclin-like 181 290 IPR036915 -
Amo01g1335 330 SMART cyclin_7 102 190 IPR013763 -
Amo01g1335 330 Coils Coil 60 80 - -
Amo01g1335 330 CDD CYCLIN 97 189 IPR013763 -
Amo01g1335 330 Gene3D - 81 197 - -
Amo01g1335 330 PANTHER CYCLINS 24 323 IPR039361 -
Amo01g1335 330 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 24 323 - -
Amo01g1335 330 SUPERFAMILY Cyclin-like 63 196 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1335 Amo-Chr1 22449090 22451097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1335 19 307 Core Cell Cycle Gene Families AT1G70210 36.789 5.65e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1335 K18810 - gmx:100799323 381.333