Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1327 ATGGATTATTCAACTTCAGATTGTCAGCTGAACCACAGCGAAGTGGATTTTGAATTTGAATCCAATGAACTCCTTGAGCCCTTCTGTGATGTTGATGAGCAGTTTGTTCCCAAGATTAGGATGACTTTTAACACCCTTGAAGATGCTGCAAAATTCTACAAGGATTATTCGAAGGCTGTAGGTTTTTCTATAAGAGTTCGGAGTACAAATAAGAAGAGAAACAAAATTAAGAATCAATTGATTACATGTAGCAGAGAAGGGAAATGGAAATCGAAAATATCTCCGACGAAGAAGACAAATCCCTCAGCAGGATTAAATTGTCCCGCAAGAATTTATATACACATATTGAAGGACATTGGTGTTTGGTTCATTTCCAAGGTCGTGTTGCATCATTCACATCCTTGCTGTCGAAATCAAGCAGAGATGCTTAAACAGCACAGGGAACTAAGCATGTCGTGCGTCGTACAATAG 471 0.3885 MDYSTSDCQLNHSEVDFEFESNELLEPFCDVDEQFVPKIRMTFNTLEDAAKFYKDYSKAVGFSIRVRSTNKKRNKIKNQLITCSREGKWKSKISPTKKTNPSAGLNCPARIYIHILKDIGVWFISKVVLHHSHPCCRNQAEMLKQHRELSMSCVVQ* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1327 156 Pfam FAR1 DNA-binding domain 51 135 IPR004330 -
Amo01g1327 156 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1327 Amo-Chr1 22062539 22063324 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1327 FAR1 1.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1327 - - adu:110278638 240.35