Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1308 ATGGGCACCATCACATCCATTAACGCCTTGCTCTTATTCATGCTATCTACTTTCTTGCTTTTTTACTTCCCATATTTCGCCATCGGCAAAGATGAGGCCGGGCGGCAAAGACAAGCATTGGAGATTATCATAGGACCAGGCGGCCCTGGTTATTATTATCCTGGCCCTGCTCCTTCACCCGAATGGTACACTAATAACTGGAAAGGCTCAAATCCATGCAAGTACAATGGGATAAGGTGCGCCACATATCCAAACTCAAAGGAGACAGCTGTGGCCGGAATAGACCTCAACCAAGCCCAGATCACCGGTGTTAAAAACGGAACATTGAAGCTTTCCGATGTCTTGGGCGAAATTCCAGAGCTCACATTCTTCCACGTTAACTCTAACGGCTTCGGCGGCAACCTCCCAGACTTATCCGTTAAAAAGTTCAAGTATTTCTACGAACTTGACCTCAGCAACAACAAGCTCTCAGGTGCGTTCCCAATGCAAGTTCTTCAGGCTACGAATCTAACATTCCTGGACATTAGGTTCAACCAACTCTCCGGCCCAATTCCACCGGAACTCTTCGTCCAAGATCTCGATGTTATCTTCATCAACAACAACTTCTTCTCCGGCAACCTCCCTAGTAATTTCGGCTCAACTCCTGCCAGGTACCTCACGTTCGCCAACAATCAATTTAGCGGCACGATCCCAAGCAGCATTGGTAAAGCTTCGAAGACGCTAACCGAAGTGCTGTTCTTGGGGAACAACCTTGACGGATGCCTGCCCTACGAGATAGGCTTGCTCGGCAAGGCGACAGTCTTTGATGCGAGCAAGAACATCATTACGGGTCCCATTCCTCACTCTTTCGGATGTTTAAAAAGCATTCAGTTCCTCAACCTTGCAAGCAACCAGCTGTACGGTGCAGTTCCGGAGATCGTCTGCATTCTCCCGGGGCTCCGCAACAACGGCAACTTGTCGTTGTCGGACAACTACTTTACCCAAGTTGGTCCTGAGTGCTTGAAGCTGATAGAGAACAAGGTTCTTGACGTCAACAATAACTGCATCTTGGGGCTTCCTAATCAAAGATCACCGGAAGAATGCCACGCATTCTTTTCCAATGTGAAACCATGCTCTAACCCCAAATTTTTCCATTACATCCCTTGCAAAACGTACTACTCGCAGTTACACTCCCAAGCCGCAGCGGCGCAGCTGCTTCAAGAAGATAGTTCTTTCTATTCTTCACCGCCTGAGCCGGTAACCTATAAGACTCTCAGACCTCATCGCTTATGA 1272 0.4819 MGTITSINALLLFMLSTFLLFYFPYFAIGKDEAGRQRQALEIIIGPGGPGYYYPGPAPSPEWYTNNWKGSNPCKYNGIRCATYPNSKETAVAGIDLNQAQITGVKNGTLKLSDVLGEIPELTFFHVNSNGFGGNLPDLSVKKFKYFYELDLSNNKLSGAFPMQVLQATNLTFLDIRFNQLSGPIPPELFVQDLDVIFINNNFFSGNLPSNFGSTPARYLTFANNQFSGTIPSSIGKASKTLTEVLFLGNNLDGCLPYEIGLLGKATVFDASKNIITGPIPHSFGCLKSIQFLNLASNQLYGAVPEIVCILPGLRNNGNLSLSDNYFTQVGPECLKLIENKVLDVNNNCILGLPNQRSPEECHAFFSNVKPCSNPKFFHYIPCKTYYSQLHSQAAAAQLLQEDSSFYSSPPEPVTYKTLRPHRL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1308 423 PANTHER BNAC05G26270D PROTEIN 60 417 - -
Amo01g1308 423 Gene3D Ribonuclease Inhibitor 216 370 IPR032675 -
Amo01g1308 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 60 417 - -
Amo01g1308 423 Gene3D Ribonuclease Inhibitor 57 215 IPR032675 -
Amo01g1308 423 SUPERFAMILY L domain-like 60 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1308 Amo-Chr1 21750839 21752855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1308 59 366 Leucine-rich Repeat extension Gene Families AT4G13340 46.278 3.11e-80 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1308 - - ahf:112800345 725.317