Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1307 ATGGATATGCGTTTGCACCTGAAGATAGAATTGCAAGGTCAAAACATAAAGAAGCTGGTTAAGGATGGTTTCATTATCAGGAAACCCACCAATATTCACTCCTGTTCACGTGCCCGTAGGATGAAGGAAGCCAAGCGAAAAGGACGTCACTCTGGCTATGGAACAAATATTTGA 174 0.4253 MDMRLHLKIELQGQNIKKLVKDGFIIRKPTNIHSCSRARRMKEAKRKGRHSGYGTNI* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1307 57 SUPERFAMILY Ribosomal protein L19 (L19e) 13 55 IPR035970 GO:0003735|GO:0005840|GO:0006412
Amo01g1307 57 MobiDBLite consensus disorder prediction 35 57 - -
Amo01g1307 57 PANTHER 60S RIBOSOMAL PROTEIN L19 13 55 IPR039547 GO:0003723|GO:0003735|GO:0022625
Amo01g1307 57 PANTHER RIBOSOMAL PROTEIN L19 13 55 - -
Amo01g1307 57 Pfam Ribosomal protein L19e 14 55 IPR000196 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1307 Amo-Chr1 21697666 21698435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1307 14 54 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 85.366 8.20e-19 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1307 K02885 - han:110937065 79.7221