Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1276 AAATACAATTCTTCTAATTTCCCTCGTTCAACCCCAAATTCACACCATTCTTCGCTTATGTCGTCACTCCGTCACGGTGACGGTTGTGCCACTGTCGCTCCTCCTGCTCACGCCGCCGTTGCACTCTGTTGCTGCCGTGCCGTTGTCACTCCTTATAGTCGCACCACCGTCTCTCCTCGTGCTCGCACCGCCGTGATAAGCAAGAGGAAGATAATGGGAACGTCGCTGGTTTCGAACGTGAAGCGCGAGGTTTCGATCATGAGCAAGCTCAACCACCCGAACATCGTGAAGCTGCACGAGGTGCTGGCAACAAAGACCAAGATCTATTTTGTATTGGAGTTCGTTAAAGGCGGTGAGTTATTTGCTAAGGTTTCGAAAGGGAGGTTCAGCGAGGATCTCGCCCGCAAGTATTTCCAGCAGCTTATCTCCGCCGTAGGGTACTGCCACTCGTGCGGCGTTTTCCACCGTGATTTGAAGTAG 480 0.5229 KYNSSNFPRSTPNSHHSSLMSSLRHGDGCATVAPPAHAAVALCCCRAVVTPYSRTTVSPRARTAVISKRKIMGTSLVSNVKREVSIMSKLNHPNIVKLHEVLATKTKIYFVLEFVKGGELFAKVSKGRFSEDLARKYFQQLISAVGYCHSCGVFHRDLK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1276 159 Gene3D Transferase(Phosphotransferase) domain 1 60 159 - -
Amo01g1276 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1276 159 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 62 159 - -
Amo01g1276 159 SMART serkin_6 36 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1276 159 Pfam Protein kinase domain 70 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1276 159 MobiDBLite consensus disorder prediction 1 20 - -
Amo01g1276 159 SUPERFAMILY Protein kinase-like (PK-like) 69 159 IPR011009 -
Amo01g1276 159 PANTHER - 62 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1276 Amo-Chr1 20606652 20607358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1276 42 159 CBL-interacting serine-threonine protein kinases AT5G01820 60.000 4.84e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo01g1276 Pkinase 1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1276 - - aip:110270608 167.933