Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1245 ATGGAGTGGTGGGTGTCAATGCCAAAGGTGGAGTTGCATGCTCATCTCAATGGATCCATTAGAGACTCCACACTGCTAGAACTCATAAAGGCCTTAGGTGAAAAGGGTGTTATAAATTTCTCTCAAGTGGAGCATATTATCATGAAGTGTATATGTATCATGAAGAGATGTTCTCCTTTGCCACTTGTGAAATGTCAGGATTATATGCTTTTTGACCCTTTCATATATCATGGGATGGCTGAACTGCATGACAGGCACAGAGAAATGCGCCTTGGTGTTGATAACACGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCGAGGATGTCATTATGAAGTCAATGAAACAGCAAATATACATGTCTGTTATGGTGGATTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGCTAACTAACATCTGCCATAAACAGGAGGAAAACAAAATCCTAGAGAAAACACACCGCCAAAAGATTTTGGAAGTTGAAAAGCTTAGCCCAACTATTTGA 540 0.4093 MEWWVSMPKVELHAHLNGSIRDSTLLELIKALGEKGVINFSQVEHIIMKCICIMKRCSPLPLVKCQDYMLFDPFIYHGMAELHDRHREMRLGVDNTSYEELLALEERIGDVSTGLSEDVIMKSMKQQIYMSVMVDSSTDLEPCCICQLTNICHKQEENKILEKTHRQKILEVEKLSPTI* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1245 179 Gene3D - 1 161 - -
Amo01g1245 179 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 55 147 IPR045191 GO:0061630
Amo01g1245 179 SUPERFAMILY Metallo-dependent hydrolases 3 103 IPR032466 -
Amo01g1245 179 Pfam Microtubule-associated protein 70 150 179 IPR009768 GO:0007010|GO:0008017
Amo01g1245 179 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 55 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1245 Amo-Chr1 19899885 19901952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1245 63 147 C3H Transcription Factor Family AT2G15530 64.773 6.58e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1245 - K19041 ahf:112747303 258.07