Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1230 ATGGATCCTTCAAGCTCAGATTGTGTGCTGAATCCAGGCGATGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCGGTTGTTGATGACGAGCTTGTTCCGAAGGTCGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCAACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTTCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATTACATCACCCAGAACAGCTCGCTCATTCAGTTCGTCAAACAGTACGATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACCGTGTGCAACCAAATCCTCCATCGAAGCTCAGTTTCAAGATGCGTACACTCACGCAAAGTTTAGGGAAGTCCAAGCCCAATTCAGAGGAAAGGCGAATTGCATCACCAGATTAA 681 0.4493 MDPSSSDCVLNPGDVDYEFESNEVPEPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGSWIISKVVLDHSHPCCPSKAEMLKQHRELSITSPRTARSFSSSNSTIIASEAGSKQRENQMLQIFIRSYRVQPNPPSKLSFKMRTLTQSLGKSKPNSEERRIASPD* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1230 226 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo01g1230 226 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 198 - -
Amo01g1230 226 MobiDBLite consensus disorder prediction 207 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1230 Amo-Chr1 19376302 19378482 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1230 FAR1 3.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1230 - - adu:110278638 306.605