Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1219 ATGGCACCGAACCTTCAACCTTGCATCATAATAATTAACAAGCACTGCAACATAGCTAAAAATAGAATGACACCATTAATCTCCTACACCTTCTTTTCTATTCTCTTCCTCATCATAACGCTCAAGTTCCACTTCTCAACAAGAAGGTTCAAGAACCTTCCACCAGGTCCACCACCTCTTCCCATCTTGGGCAACCTCCGCCAACTCAACTTCCCCTTGCACCGAACCCTTCACGCCTTCTCTCAAAAGTACGGCCAAGTCTTCTCCCTCTGGTTCGGTTCCCAACCCGTCATCGTCGTCTCATCGCCCTCTCTCGTTCAAGAATGCTTCACAAAGAACGACATCATCTTGGCCAACCGGCCGCCGCTCCGTTCCGCGAAACACGTCGGCTACAACTTCACCACCGTCACGGTCGCACCTTATGGCGACCACTGGCGCAATGTCCGCCGCATTATCTCCCTTGATGTCCTCTCCACGCACCGCCTCAACTCGTTCTTGGGAATACGAAGGGACGAGACCCTGAGGCTGGTACAAAGCCTTGCGGCTCCATCGCGAAATGGTGAAGATTTTGCCAAGGTTGAGCTGAAGTCGAAGCTCACGGAGATGACGTTCAACACCATCATGAGGATGATCTCGGGGAAGAGGTACTATGGTGATGACTGTGACGTCGCGGACACAGAGGAAGCGAAGCAGTTCAGGGAGCTCATCAAAGAACTTTTATCGTTGGGAGGGTCTAGTAACCCTTTTGAATTCGTGAAGGTTCTTCGGTGGTTCGATTTTGGGAACCTAGAGAAGCGGCTCAAGGATATTGCTAGGAGAAGCGATGTATTCTTGCAGGGGCTTATTGATCAACACAGAATGAAACAGGGTGGAGATAAAAATACTATGATTGACCATTTATTGAGCTTGCAACAGTCGCAGCCCGAGTACTACACGGATCAAATCATCAAAGGCATTGTTCTGGTTATGCTTCTTGGAGGAACAGAAACATCAGCAACTTCTTTAGAATGGGCTATGGCTGCATTACTAAACCATCCAGAAGTGTTAAAGAAGGCCAAGGAAGAAATAGATACTCAAATAGGACAAGATCGCTTAATAGAAGAATCCGACATTTCGAAACTCCCTTACCTACAAAATGTTATCCACGAGACATTTCGGTTGCACCCTGCATTTCCATTATTGGCGCCACATTATTCTTCAAAAGATTGCACCGTAGGAGGATACAACTTCCCAAAGAATACTATTCTGTTGGTAAATGCTTGGGCTATTCATAGAGATCCTGAACTATGGAGCAACCCTACTGAGTTCGAGCCTGAGAGATTTGAGAAAGAAGGAGAAGCAGAAAAGTTGATTCCGTTTGGGCTTGGAAGAAGGGCATGTCCTGGAGCAAACTTGGGGAACCGTACAGTGAGTTTAACTTTGGGTTTATTGATTCAATGTTTTGAATGGAAGCGAATAAGTGAAGACGAAATTGATATGAGTGAAGGAAGAGGAGCGACCACCCCGAAGTTGATTCCTTTGGAGGCCTTATGTAAAGCAGATTCAAGTATCATTGACAAGGTTTTTTAA 1569 0.4627 MAPNLQPCIIIINKHCNIAKNRMTPLISYTFFSILFLIITLKFHFSTRRFKNLPPGPPPLPILGNLRQLNFPLHRTLHAFSQKYGQVFSLWFGSQPVIVVSSPSLVQECFTKNDIILANRPPLRSAKHVGYNFTTVTVAPYGDHWRNVRRIISLDVLSTHRLNSFLGIRRDETLRLVQSLAAPSRNGEDFAKVELKSKLTEMTFNTIMRMISGKRYYGDDCDVADTEEAKQFRELIKELLSLGGSSNPFEFVKVLRWFDFGNLEKRLKDIARRSDVFLQGLIDQHRMKQGGDKNTMIDHLLSLQQSQPEYYTDQIIKGIVLVMLLGGTETSATSLEWAMAALLNHPEVLKKAKEEIDTQIGQDRLIEESDISKLPYLQNVIHETFRLHPAFPLLAPHYSSKDCTVGGYNFPKNTILLVNAWAIHRDPELWSNPTEFEPERFEKEGEAEKLIPFGLGRRACPGANLGNRTVSLTLGLLIQCFEWKRISEDEIDMSEGRGATTPKLIPLEALCKADSSIIDKVF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1219 522 Gene3D Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Amo01g1219 522 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 28 515 - -
Amo01g1219 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 28 515 - -
Amo01g1219 522 Pfam Cytochrome P450 54 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1219 522 SUPERFAMILY Cytochrome P450 54 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1219 Amo-Chr1 19070133 19072574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1219 31 522 Cytochrome P450 AT4G37370 55.622 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1219 K13260 - gmx:100811727 686.026