Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1199 ATGAGCAACCATCGCCACAAAACTCTTCCTCTTTCTCTCACTTCACGGTGGTTGAAAAACGTCCTTGCATTCCTTCTCCTCGTTACCGTTAACCAATGTTATGCCCTCACTAGAGACGGCGTCCTCTTACTCTCTTTCAAGTACGCCGTTCTAAACGACCCTCTCTCCGTTCTTGCCACCTGGAACTACAGCGACGCCACTCCATGTTCTTGGAACGGCGTTACGTGCTCCAGCGTTTCCGGTAACGGTTTCCAGAACAGAGTAACGGCTTTGTCACTTCCCAATTCTCAGCTTGTGGGTTCAATCTCTTCCGATCTAGGCTCCATAGAGCATCTTCAAATTCTTGACCTCTCCAACAACTCACTCAATGGCTCCATCCCCGCTTCGCTATTCCAAGCGTCCGAGCTTCGGTCGCTGAACCTCTCTAATAACCTCATTAACGGTGTGCTTCCAGGTTCGGTGGTGCAGCTTCGGAATCTCCGGTTTCTCAACGTATCAGACAATTACTTGGCGGGAAAAATCCCTGATAATTTGTCAAACATGCAGAACCTAACCGTGTGTTATTTGAAGAGCAATTACTTCACTGGCTTTCTCCCCAGCGGGTTAAGTACCGTGCAGTTTCTGGATATTTCGAGTAACCTGCTGAACGGGACTCTGCCACTGGGATTTGGTGGTGACCAAGTTCATTACTTGAACATCTCATACAACAGGTTTACTGGAAGTATACCGGTTCAGTTTGCGGAGAAAATCCCGCGAAACGCAACTGTTGACTTGTCGTTTAACAATCTCACCGGCGAGATTCCGGACTCACCTGTTCTTTTGAGTCAGAAAACGACGTCGTTTTCAGGGAACCCTGATCTGTGTGGGGAACCTACGAAAAATCCGTGTCCAATTCCTTCTTCACCGTCGTCGGAGCCGAGAGCTTCCTCTCCTACTTCTCCGCCGGCGATAGCTGCGATTCCGAAGACGTTCGGTGATTCTCATCCGCTGGCGCCAGCTGGCGACGGTTCAAGTTCAAGTAACGAGAAACAGAGCGGTGGTCTAAGGAGAGGAACGATTATAGGAATCGCGGTGGGTGACGTCGTCGGCATTGGCATCTTAGCTATGATTTTCATCTACGTTTATCGGTTGAAGAGGAAGAGAGAAGTGGAGAGTGCGATCAAGGACGAAGCTTCTTTTGCGAGGAGCGAAACGTCGTCGTCTTCGGAGTCGAGAGGGTTCACAAGGTGGTCCTGCTTACGGAAGAGAGTAGAGGAGGAAAAAGAATCAGATAGCACGTGCTCTTCAGACAGCGACGTGGAAGCAGCACGTGACGGATACAACTACAACCAACACCAGAATGGTCGTCAGGAGAATTCGAAGCAGCACGAAGGGTCAGGGCAGCAGAACAAGACGGGGACTTTGGTGACTGTTGATGGCGATAAGGAGCTTGAAGTTGAGACTCTTCTCAAGGCTTCAGCGTACATATTGGGCGCCACTGGTTCAAGCATAATGTACAAGGCGGTGCTTGAAGATGGAACTTCCTTGGCGGTTCGTAGAATCGGTGAGAATGGCGTTGAGAGGTTCAAGGACTTTGAGAACCAGGTTCGGGTCATAGCTAAATTGGTTCACCCAAATTTGGTTCGTATTCGTGGGTTCTATTGGGGACACGAGGAGAAGCTCATCATTTATGACTTCGTTCCAAATGGTAGCCTCGCTAACGTTCGTTACAGGAAAGTGGGCTCCTCTCCAAGCCATTTACCATGGGAACTTCGGCTCAAGATAGCGAAAGGGGTAGCACGTGGGCTAGCTTACCTCCACGAGAAGAAGCACGTGCATGCGAATCTGAAGCCCAGCAATATTCTATTGGGCAGCGACATGGAGCCCAAGATTGGAGACTTTGGGCTCGAAAGGATTGTGACGGGTGATACTAGCTACAAAGCTGGAGGATCGGCACGTATATTTGGGAGCAAGAGATCCACGGCATCACGTGACAGCTTTCAAGACATAACACTTGGGCCTAGCCCAAGTCCAAGCCCAAGTTCGATTAGTGGTGTATCTCCTTACCATGCTCCTGAGTCGCTCAGGAACCTTAAGCCTCATCCAAAGTGGGACGTGTACTCTTTTGGGGTCATTTTTCTTGAACTCTTATCAGGAAAGATTGTTGTCTTGGATGATATTGGCCAAGGGACTGGGCTTTTAGCTGAGGATAAGAATCGGGCTTTGCGGATGGCTGATGCTGCTATAAGACCTGAGATGGAGGGTAAGGAAGAGGCTTTGTTGGCTAGCTTCAAGTTAGGTTACAGTTGCGTGTCTAGTGTTCCGCAAAAAAGGCCACCAATGAAAGAGGTATTACAAGTTCTTGAAAAGATACCATCGTCATCAACTTCTTCTTCTTCTTCATTTTTTTACAGCCACTAA 2400 0.4892 MSNHRHKTLPLSLTSRWLKNVLAFLLLVTVNQCYALTRDGVLLLSFKYAVLNDPLSVLATWNYSDATPCSWNGVTCSSVSGNGFQNRVTALSLPNSQLVGSISSDLGSIEHLQILDLSNNSLNGSIPASLFQASELRSLNLSNNLINGVLPGSVVQLRNLRFLNVSDNYLAGKIPDNLSNMQNLTVCYLKSNYFTGFLPSGLSTVQFLDISSNLLNGTLPLGFGGDQVHYLNISYNRFTGSIPVQFAEKIPRNATVDLSFNNLTGEIPDSPVLLSQKTTSFSGNPDLCGEPTKNPCPIPSSPSSEPRASSPTSPPAIAAIPKTFGDSHPLAPAGDGSSSSNEKQSGGLRRGTIIGIAVGDVVGIGILAMIFIYVYRLKRKREVESAIKDEASFARSETSSSSESRGFTRWSCLRKRVEEEKESDSTCSSDSDVEAARDGYNYNQHQNGRQENSKQHEGSGQQNKTGTLVTVDGDKELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGENGVERFKDFENQVRVIAKLVHPNLVRIRGFYWGHEEKLIIYDFVPNGSLANVRYRKVGSSPSHLPWELRLKIAKGVARGLAYLHEKKHVHANLKPSNILLGSDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITLGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVIFLELLSGKIVVLDDIGQGTGLLAEDKNRALRMADAAIRPEMEGKEEALLASFKLGYSCVSSVPQKRPPMKEVLQVLEKIPSSSTSSSSSFFYSH* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1199 799 SUPERFAMILY L domain-like 38 291 - -
Amo01g1199 799 MobiDBLite consensus disorder prediction 658 683 - -
Amo01g1199 799 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Amo01g1199 799 Pfam Protein kinase domain 490 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1199 799 Gene3D Ribonuclease Inhibitor 35 202 IPR032675 -
Amo01g1199 799 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 787 - -
Amo01g1199 799 MobiDBLite consensus disorder prediction 658 681 - -
Amo01g1199 799 MobiDBLite consensus disorder prediction 283 347 - -
Amo01g1199 799 Gene3D Transferase(Phosphotransferase) domain 1 560 795 - -
Amo01g1199 799 Gene3D Phosphorylase Kinase; domain 1 446 559 - -
Amo01g1199 799 Pfam Leucine rich repeat 111 170 IPR001611 GO:0005515
Amo01g1199 799 Gene3D Ribonuclease Inhibitor 203 298 IPR032675 -
Amo01g1199 799 ProSiteProfiles Protein kinase domain profile. 484 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g1199 799 MobiDBLite consensus disorder prediction 443 468 - -
Amo01g1199 799 CDD STKc_IRAK 490 784 - -
Amo01g1199 799 SUPERFAMILY Protein kinase-like (PK-like) 489 785 IPR011009 -
Amo01g1199 799 MobiDBLite consensus disorder prediction 333 347 - -
Amo01g1199 799 PANTHER BNAC07G16060D PROTEIN 21 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1199 Amo-Chr1 17852201 17855364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1199 22 799 Receptor kinase-like Gene Family AT4G37250 58.417 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo01g1199 Pkinase 2.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1199 - - ahf:112799685 1452.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g1199 01 17852201 17855364 Amo11g0825 11 18511206 18514257 hybridization