Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1183 ATGGAATCAGTGTTAGAAGAACAGAATATTGAAGATGTGCCCAAGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCTAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGAAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGGACCAACCTAGAACCAACTACAATTGCCCTGCAAGGATTTCTATTAGGTTTAATAAGGAGGGTCTTTGGATTATATCGAAGGTGTGCTTGGATCATTCACATCCTTGTGATCCAGAGATGGCAAAACTGTTGACACGTAATAGAGAGATGACTATGTCACATGTGTCGAGTCATTGA 408 0.3897 MESVLEEQNIEDVPKVGMCFGTIEDANQFYQNYAKRVGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKDQPRTNYNCPARISIRFNKEGLWIISKVCLDHSHPCDPEMAKLLTRNREMTMSHVSSH* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1183 135 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 118 - -
Amo01g1183 135 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1183 Amo-Chr1 17358976 17360263 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g1183 FAR1 5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1183 - - adu:107485253 263.462