Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1175 ATGGGTTCAGGCGATTGGTTTAAGACATTAATTTCAAGAAAATCGAAAGAAAGAAAACCCAAGAAAGGAAAGGGTACTTTAGCTTCAGCGAAATTAAGTGCACTGAACTCAAATGATTGTACAAGAAGAGACTCTAGTGACTTAGCAAATGGTGCTAAAGCTGAAAATATTGGGTCAGTTGAAACTTTGCTGCAACAAGAATCCAGACTGCATTCCGGGCTTATAAGAAAGGCTCTACGCCGCTTGAAAGGGATCATAAAACTGCAGATTGTAACACAGAGTTACTCGGTTAAAAAGCAAGCCAATACTGCTATAACTTACCTTCATTCATGGAGCAAGATACAGACTGAGATTAGAGCTCGAAGAATCTYTATYGTTGAATGGTGTAGTGGTTCTGAAACCATGGAGGAGATTGTTGGAAGGATACATCAGAGAGAAGAAGCAGCTGTTAAGCGTGAAAGAACCCTTGATGAGATTAAAGACAAATCACTTCGTAAAAAAGTTAGTAAAAGTACATGTAAAGATTTTGTTAGTTTGGTTCAAGCATGGCTAAGKAAAKTTCAGCGCTCAAAATCATTATGGGGTGTTTTTGCTGAGACCAACCAAAGTGAGCTGTCAGCATTCATATCATATGCATTGGCATTTCCTAATAACTTTCTTGCCCTTGTAGACACTTATGATGTCATACAAAGTGGAATCCCTAACTTCTGTGCAGTTGCATTAGCTTTCAATGAGTTAGGATACAAAGCAGTTGGCATTAGACTGGACTCTGGTGACCTTGCCTATTTGTCTTGTCAAGCCAGGAAGATCTTTTGCTTCATTGAAAAGGAATTCGCGGTGTCTGGCTTTGGGAAGACTAGTATTACAGCTAGTAATGATCTTAAAGAGGAAACTTTAGATGCTTTAAATAAATAG 915 0.3847 MGSGDWFKTLISRKSKERKPKKGKGTLASAKLSALNSNDCTRRDSSDLANGAKAENIGSVETLLQQESRLHSGLIRKALRRLKGIIKLQIVTQSYSVKKQANTAITYLHSWSKIQTEIRARRIXIVEWCSGSETMEEIVGRIHQREEAAVKRERTLDEIKDKSLRKKVSKSTCKDFVSLVQAWLXKXQRSKSLWGVFAETNQSELSAFISYALAFPNNFLALVDTYDVIQSGIPNFCAVALAFNELGYKAVGIRLDSGDLAYLSCQARKIFCFIEKEFAVSGFGKTSITASNDLKEETLDALNK* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1175 304 PANTHER NICOTINATE PHOSPHORIBOSYLTRANSFERASE 150 304 - -
Amo01g1175 304 Gene3D Aldolase class I 167 304 IPR013785 -
Amo01g1175 304 MobiDBLite consensus disorder prediction 1 28 - -
Amo01g1175 304 SUPERFAMILY Nicotinate/Quinolinate PRTase C-terminal domain-like 197 303 IPR036068 GO:0009435
Amo01g1175 304 PANTHER NICOTINATE PHOSPHORIBOSYLTRANSFERASE 150 304 IPR007229 GO:0004516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1175 Amo-Chr1 17213792 17216332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1175 76 156 IQD Protein Family AT2G33990 47.170 5.11e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1175 K00763 - gmx:100796825 244.202