Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1170 ATGGGTTCAGGCGATTGGTTTAAGACATTAATTTCAAGAAAATCGAAAGAAAGAAAACCCAAGAAAGGAAAGGGTACTTTAGCTTCAGCGAAATTAAGTGCACTGAACTCAAATGATTGTACAAGAAGAGACTCTAGTGACTTAGCAAATGGTGCTAAAGCTGAAAATATTGGGTCAGTTGAAACTTTGCTGCAACAAGAATCCAGACTGCATTCCGGGCTTATAAGAAAGGCTCTACGCCGCTTGAAAGGGATCATAAAACTGCAGATTGTAACACAGAGTTACTCGGTTAAAAAGCAAGCCAATACTGCTATAACTTACCTTCATTCATGGAGCAAGATACAGACTGAGATTAGAGCTCGAAGAATCTATATAGTGACTGAAGACAGGATCAGGCGGAAAAAACTAGAAAATTAG 417 0.3885 MGSGDWFKTLISRKSKERKPKKGKGTLASAKLSALNSNDCTRRDSSDLANGAKAENIGSVETLLQQESRLHSGLIRKALRRLKGIIKLQIVTQSYSVKKQANTAITYLHSWSKIQTEIRARRIYIVTEDRIRRKKLEN* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1170 138 MobiDBLite consensus disorder prediction 1 28 - -
Amo01g1170 138 PANTHER IQ-DOMAIN 9 1 138 - -
Amo01g1170 138 PANTHER IQ-DOMAIN 5-RELATED 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1170 Amo-Chr1 17129801 17130537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1170 76 138 IQD Protein Family AT2G33990 57.143 1.31e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1170 - - vun:114186748 152.525