Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1147 ATGGCTGAACAAGAAAACCAAGAAATTGGCCACAAGGAACTCGCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTATATCCTTGAAACGAGTGTGTTTCCAAGAGAGCATGAATGCATGAAGGAGCTCCGTCAGATGTCAGAAAAACACCCCTGGGGTCTCATGGCTACCCCACCAGACGAAGGACAACTTATAAACATGCTGGTTAAACTCATAAACGCAAAGAAGACTATGGAAATTGGTGTCTACACTGGTTATTCTTTACTCTCTACTGCTCTTGCTCTTCCTCATGATGGAAAGATCTTTGCCATAGACATCAACCGGGAATATTATGAACTTGGACTGCCCATGATTGAAAAAGCTGGAGTGGCTCACAAAATTGATTTCAAAGAAGGATGCGCTCTTCCTCTTCTTGACGAATTGTTATTAGATGAAAATAACAAGGGGGCATTTGATTTTGTCTTCGTGGATGCGGATAAGGATAACTACTTGAACTACCATAAGAGGGTGATTGAGCTGGTGAGAGTTGGGGGATTGATTGGCTACGACAACACTCTATGGAGTGGTGCTGTGGCGCGCCCACCTGATGCACCAATGCTGGATTATGTGAAGCAATTCCGTAGTTATGTCATAGAGGTCAACAAGTACCTCGCGCATGATTCAAGGATCGAGATTTGTCAAATCCCTGTTGGTGATGGCATTACCCTGTGCCGCCGCATCATATGA 732 0.4454 MAEQENQEIGHKELAHKTLLQSDALYQYILETSVFPREHECMKELRQMSEKHPWGLMATPPDEGQLINMLVKLINAKKTMEIGVYTGYSLLSTALALPHDGKIFAIDINREYYELGLPMIEKAGVAHKIDFKEGCALPLLDELLLDENNKGAFDFVFVDADKDNYLNYHKRVIELVRVGGLIGYDNTLWSGAVARPPDAPMLDYVKQFRSYVIEVNKYLAHDSRIEICQIPVGDGITLCRRII* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1147 243 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 2 243 - -
Amo01g1147 243 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 18 242 IPR002935 GO:0008171
Amo01g1147 243 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 241 IPR029063 -
Amo01g1147 243 CDD AdoMet_MTases 81 182 - -
Amo01g1147 243 PANTHER O-METHYLTRANSFERASE-RELATED 2 243 - -
Amo01g1147 243 Pfam O-methyltransferase 32 242 IPR002935 GO:0008171
Amo01g1147 243 Gene3D Vaccinia Virus protein VP39 8 243 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1147 Amo-Chr1 16021379 16025285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1147 3 242 Monolignol Biosynthesis Gene Families AT4G34050 70.000 2.16e-133 375