Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1126 ATGGAGTGGTGGGTGTCAATGCCAAAGGTGGAGTTGCATGCTCATCTCAATGGATCATTAGAGTCTTCACACTGCTGTATTAAAGGACAAAAAGGCATATCTACGAGTTATTATTGCAGAGAGCAGGCTTCTAGTGCATCTGGCAAAGCAGTGTCTGGTGGCATGTCCAGTGATGAAAAAAAATCAGTATTCTTGTCTTGTCAACAGGATTGCTTAACTATTTGCCAAGTTTTGATTGCAATGCGGAGGGGTGATAACTTAAGGGCCGAGGATTATATGCTTTTTGACCCTTTCATATATCATGGGATGGCTGAACTGCATGACAGGCACAGAGAAATGCGCCTTGGTGTTGATAACACGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCGAGGATGTCATTATGAAGTCGATAAAACAGCAAATATACATGTCTGTTATGGCGGAGTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGCTAACTAACAGCTGCCATAAACAGGAGGAAAACAAAATTCTAGAGAAAACACACCGCCAAAAAATTTTGGAAGTTGAAAAGCTTAGCCCAACTATTTAA 612 0.4183 MEWWVSMPKVELHAHLNGSLESSHCCIKGQKGISTSYYCREQASSASGKAVSGGMSSDEKKSVFLSCQQDCLTICQVLIAMRRGDNLRAEDYMLFDPFIYHGMAELHDRHREMRLGVDNTSYEELLALEERIGDVSTGLSEDVIMKSIKQQIYMSVMAESSTDLEPCCICQLTNSCHKQEENKILEKTHRQKILEVEKLSPTI* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1126 203 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 83 171 IPR045191 GO:0061630
Amo01g1126 203 Pfam Microtubule-associated protein 70 179 203 IPR009768 GO:0007010|GO:0008017
Amo01g1126 203 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 83 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1126 Amo-Chr1 15589038 15591471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1126 74 171 C3H Transcription Factor Family AT2G15530 68.317 1.59e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1126 - K19041 ahf:112747303 227.254