Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1091 ATGGAGATGGCTGAGGTTGGAGTAGTTAGAACAAGAGCTTCAGCAGCATTGGCCATGGATGTAGCTGTTGCTACTGCTGCAACTTCACCTTCACCCGATGAACCCGCACTCAAGAGAAGAAAAATCAAAAGCGAAGACGAAACAAGCCAAGATCTCATAAAATTCTCAGCATCCTCATTCTCTGACCAGCTTAAGAGTAGCATTGACGGTGAGGAAACAGTGCCGCGGGAGGCGGCGGCGGAGGAGGAGGAGGAACGGTCCTCCGACGAATCTCCAGCGTCATGTTGTTCGAGCAATAACGGATCCTCCACCTGGCTCCACGAAGAGAGCATCAAATTCTTAGATCTTGAGGTTCAGAGCTCCCAGCAGGCTGAAACGTCGGCGTGCTACTGCGAGAACCAAATAAGGAGAGAAATGAGCCTCACGAGTGAGCTAGGAATGAATTGGCAAGAAGTGGAATCATCAATGGATAATAATTATAATTATAATAATGATAATAATAATAAGCGAACAAGAACAACAACAATAGTCAATAATTCCCGCGTTGTTCTATCAACGAAGATGCCAACAGAGTTGGAGCTTGAAGAATTTTTTGCTACCGCAGAGAAAGACATCCAGAAACGATTTTCAGACAAATATAATTTTGATATTGTGAAGGATCTGCCATTGGAAGGACGCTACGAGTGGATTCAAGTAAAATTAACCCCATAA 711 0.4444 MEMAEVGVVRTRASAALAMDVAVATAATSPSPDEPALKRRKIKSEDETSQDLIKFSASSFSDQLKSSIDGEETVPREAAAEEEEERSSDESPASCCSSNNGSSTWLHEESIKFLDLEVQSSQQAETSACYCENQIRREMSLTSELGMNWQEVESSMDNNYNYNNDNNNKRTRTTTIVNNSRVVLSTKMPTELELEEFFATAEKDIQKRFSDKYNFDIVKDLPLEGRYEWIQVKLTP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1091 236 MobiDBLite consensus disorder prediction 34 50 - -
Amo01g1091 236 MobiDBLite consensus disorder prediction 25 102 - -
Amo01g1091 236 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 8 233 - -
Amo01g1091 236 Gene3D p27 181 235 IPR044898 -
Amo01g1091 236 PIRSF CKI_KRP_plant 3 234 IPR044275 GO:0004861|GO:0045736|GO:0051726
Amo01g1091 236 Pfam Cyclin-dependent kinase inhibitor 188 231 IPR003175 GO:0004861|GO:0005634|GO:0051726
Amo01g1091 236 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 8 233 IPR044275 GO:0004861|GO:0045736|GO:0051726
Amo01g1091 236 MobiDBLite consensus disorder prediction 51 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1091 Amo-Chr1 14433252 14435075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1091 188 233 Core Cell Cycle Gene Families AT5G48820 65.217 3.57e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1091 - - ahf:112720459 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0767 05 9227555 9229889 Amo01g1091 01 14433252 14435075 PCT
Amo01g1091 01 14433252 14435075 Amo05g0767 05 9227555 9229889 PCT