Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1050 ATGAAAGGAGGCAGTGAGATTATGTTGGGAAATTCTCGCAAGTGGATAATTGTGGTGGTCACCATATGGCTGCAGGCCTTCACCGGCACCAACTTCGATTTCTCGCAGTACTCCTCCGCCATGAAATCCGCCCTCAACATATCGCAGATGCAGCTCAACTACCTAGCCACCGCCAACGACATGGGCAAGCTCTTTGGCTGGTCCTCCGGCTTCGCCCTCATGTACTTCCCTCTTCCTGCCGTCATGTTCATCGCCGCCGCCATGGGCTTTGTCAGCTACGGCCTCCAGTGGCTCCTTCTCCAAGGCTTCATCCACCTCCCTTATTTTCTGGTGTTCGTTGTGAGTGTGTTAGGAGGGGTGAGCATATGTTGGTTCAACACAGTGTGCTTTGTTCTGTGCATAAGGAGCTTCCCGGTGAAGAGAGCACTGGCACTGTCCCTCACTGTAAGCTTCAATGGTGTGAGCGGGGCACTCTACACGCTGGCCGCCAATTCAATAGACCCTTCATCTCCTACTCTCTATCTGCTTCTCAATGCCCTTCTTCCCCTTCTCGTCTCCTTCGCCGCCGCCTTCTTCGCCCCAATTATGCCCCACTCTCCTGCTCATCATGATCACTCTAACAGTAACAGTCGCGACTCCATCATGTTCCTGGTACTCAACTTGCTGGCCACTCTCACTGGCCTCTACCTCCTCCTATTTGCCTCCCATGCATCCGCGGGGGATGTGGCATCCAACAGGCTCTTCTTGGGGGGCGCCATTTTCCTTCTTCTCTTGCCCTTATTCGTTGCTTATGCCAGCTCGTGGTCTCGTCCAGCAGTTCATGATGACGACCTCGAGCTGCATAAGGAACTCATCATTAGCTGCAAGAGGATGCTGGAAGAAGAGCAGTGTGGCAGCGCCGTTCTTGGAAGGCTGGATTTCTGGCTCTACTACGTTACCTACATTTGCGGAGGAACTATTGGGCTTGTGTATAGCAATAACCTGGGACAGATTGCGGAGTCAGTGGGCACGAGTTGTGAGATTTCTACACTTGTGATGGTGTATGCCTCCTTTTCCTTCTTCGGTCGCTTGCTTTCGGCTCTACCCGACTATATTGGTAGCAAATTGTACTTTGCAAGGACTGGTTGGCTATGCATTGCACTAATACCCACCCCGGTTGCATTCACATTCATGGCGCTATCACAAACTCCCCTCGCACTCCCCATAGGCACGGCGTTGATAGGCTTCAGTTCCGGATTCATATTCGCTGCTGCCGTCTCTGTCACGTCGGAACTCTTTGGTCCCAACAGTGTTGCCGTCAATCACAACCTTCTCATAACAAACATCCCAATTGGATCCCTGGTCTACGGCTTCCTGTCCGCCTTACTCTACGACGCCAACACAAATTCCGGCGTGTGCATTGGCAGGCAGTGCTACTTCTGGACTTTTGTGTGCTGGGCTTGCACGGCTGTCCTCGGACTGCTTTCTAGTCTCCTCCTGTTCTTCAGAACCAAACATGCATACCAATTACATGATGGTTTTTTAAGAGGATGA 1533 0.5205 MKGGSEIMLGNSRKWIIVVVTIWLQAFTGTNFDFSQYSSAMKSALNISQMQLNYLATANDMGKLFGWSSGFALMYFPLPAVMFIAAAMGFVSYGLQWLLLQGFIHLPYFLVFVVSVLGGVSICWFNTVCFVLCIRSFPVKRALALSLTVSFNGVSGALYTLAANSIDPSSPTLYLLLNALLPLLVSFAAAFFAPIMPHSPAHHDHSNSNSRDSIMFLVLNLLATLTGLYLLLFASHASAGDVASNRLFLGGAIFLLLLPLFVAYASSWSRPAVHDDDLELHKELIISCKRMLEEEQCGSAVLGRLDFWLYYVTYICGGTIGLVYSNNLGQIAESVGTSCEISTLVMVYASFSFFGRLLSALPDYIGSKLYFARTGWLCIALIPTPVAFTFMALSQTPLALPIGTALIGFSSGFIFAAAVSVTSELFGPNSVAVNHNLLITNIPIGSLVYGFLSALLYDANTNSGVCIGRQCYFWTFVCWACTAVLGLLSSLLLFFRTKHAYQLHDGFLRG* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1050 510 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 291 503 - -
Amo01g1050 510 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 285 - -
Amo01g1050 510 SUPERFAMILY MFS general substrate transporter 13 499 IPR036259 -
Amo01g1050 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 305 510 IPR020846 GO:0022857
Amo01g1050 510 Gene3D MFS general substrate transporter like domains 304 503 IPR036259 -
Amo01g1050 510 PANTHER NODULIN-LIKE/MFS TRANSPORTER 7 285 - -
Amo01g1050 510 PANTHER NODULIN-LIKE/MFS TRANSPORTER 291 503 - -
Amo01g1050 510 Pfam Nodulin-like 14 263 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1050 Amo-Chr1 13700205 13702246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1050 6 502 Nodulin-like Gene Family AT1G31470 53.631 1.36e-171 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1050 - - adu:107477779 954.125