Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1049 ATGCATTTCAGATGCTGGTTATTTCATCAATGTAAAGGATGTCTCTGGAGCACAACACATTCAAGAGTTCTACAGTCAAGTTGTTGCAACACATGGATCGGCGAAGAATTTGCCTGCCTCGTGCACTTCAAGACTGAGTCCAGGGCTGTGTTTCTTCCCAGAGAATGTGGTATCACAATCAGGACACCAATTTTCTTTGTTAATGCAGCATATGACTCATGGCAGATAAAGAACATATTGGCACCGGGTGTTGCTGATCCGCACGGGCAATGGCGCGATTGCAAGCTTGATATTAAGAAATGTTCTTCTGCTCAACTCAGTGTAATGCAAGGGTTCAGGACGAACTTCTTGAGCGCATTGAGTGGAGTGGGGAGCACGCCAGCTCGGGGGAAGTTCATAGATGGATGCTATGCTCACTGCCAAATGGGAACCCAAGAGACATGGATGAGAGCTGACTCGCCTGTGTTGGCCAAAACAACAATCGCCAAGGCTGTCGGAGATTGGTATTATGAGAGAAGGCCATTCCATGAGATTGATTGCACTTACCCTTGCAACCCCACCTGCCACAACCGTATCTTTGATAACAACCGCTCAGATGATTAG 603 0.471 MHFRCWLFHQCKGCLWSTTHSRVLQSSCCNTWIGEEFACLVHFKTESRAVFLPRECGITIRTPIFFVNAAYDSWQIKNILAPGVADPHGQWRDCKLDIKKCSSAQLSVMQGFRTNFLSALSGVGSTPARGKFIDGCYAHCQMGTQETWMRADSPVLAKTTIAKAVGDWYYERRPFHEIDCTYPCNPTCHNRIFDNNRSDD* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1049 200 PANTHER PECTIN ACETYLESTERASE 38 193 - -
Amo01g1049 200 Pfam Pectinacetylesterase 38 173 IPR004963 GO:0016787
Amo01g1049 200 PANTHER NOTUM-RELATED 38 193 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1049 Amo-Chr1 13667730 13668709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1049 51 193 Carbohydrate Esterase AT4G19420 49.438 1.33e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1049 K19882 - gmx:100781246 248.825