Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1048 ATGGAGATATCAAGAATTTGGCAATGGTTAAATCTTCCAGTATGTGTACTGTTATTGGTAAAGTCAGAAGGATCTGGTTTTGTTCCAATCACTTACTTGGAGGATGCAGAATCAAAAGGAGCTGTTTGGGAAATTCAAGTTAAGCACGTCTGTGCAGTTTGTTTGGATGGTAGTCCACCGGCCTACCACTTCGATAAGGGATCCGGCGAAGGTGTTAACAGCTGGATTGTTTTTCTTGAGGGAGGAGGATGGTGCAATGATGTATCTACTTGCCTTCAACGCAAGGACACTCGCTTAGGTTCATCCAAACAAATGGATACGCAGTCTGGCTTTTATGGAATACTTAACAACCAACAAGTTTATAATCCAGATTTCTACAACTGGAACAGAATCAAGATTAGGTACTGTGATGGATCATCATTTACTGGTGATGTGGAAGAAGTTGATCCAATAAACAATCTGCACTTCAGAGGAGCAAGAATTTTTGAAGCAGTCATTAAGCATTTACTTGCAAAAGGAATGGAGAATGCTGAAAATGCTATTCTCTCCGGATGCTCTGCTGGAGGATTGGCTGCTATATTGAACTGCGATCGCTTCAAATCCTTCCTACCAAATGGCGCCAGAGTGAAATGCGTGCCGGATGCCGGCTATTTTATCCATGTACCAGATGTCTCRGGAACAAAGCACATTGAAAATTTCTACAAAGGAGTTGTTGAAACACATGGATCAGCAAAGTATTTGTCTAAATCCTGCACTTCAAAATATGGTGCTGGCCTGTGCTTTTTCCCACAATATGTGGCACAAGATATCGCCACGCCCATTTTCGTTGTAAATGCYGCCTATGACTCATGGCAGATTAGAAACATTTTGGTACCGGGGATGGCGGATCCACACGGAAGCTGGAAAAACTGCAAAGAGAACWTAAGCAATTGCACACCTGATGAACTAGATGCTGTGCAAGGGTTTAGAGAGGATTTCATAAAGGCATTGAGTGGGGTGCAGAACTCTCCATCAAAAGGAATGTTCATAGATTCTTGCTACATCCACTGCCAAACGGGAATGCAAGAGCTTTGGTTCAATCCTGATGCACCTCAGCTTGCAAATACTACTATTGCTAAGGCCGTTGGTGACTGGTTTTATGAACGAAAGCCTTTCCAACACATTGATTGTGCCTTTCCATGCAACCCTACTTGTGGTAAACCTGTCTTAAATGTCAAAGCCCACCCTGAAATCTAG 1236 0.4272 MEISRIWQWLNLPVCVLLLVKSEGSGFVPITYLEDAESKGAVWEIQVKHVCAVCLDGSPPAYHFDKGSGEGVNSWIVFLEGGGWCNDVSTCLQRKDTRLGSSKQMDTQSGFYGILNNQQVYNPDFYNWNRIKIRYCDGSSFTGDVEEVDPINNLHFRGARIFEAVIKHLLAKGMENAENAILSGCSAGGLAAILNCDRFKSFLPNGARVKCVPDAGYFIHVPDVSGTKHIENFYKGVVETHGSAKYLSKSCTSKYGAGLCFFPQYVAQDIATPIFVVNAAYDSWQIRNILVPGMADPHGSWKNCKENXSNCTPDELDAVQGFREDFIKALSGVQNSPSKGMFIDSCYIHCQTGMQELWFNPDAPQLANTTIAKAVGDWFYERKPFQHIDCAFPCNPTCGKPVLNVKAHPEI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1048 411 PANTHER NOTUM-RELATED 4 405 IPR004963 GO:0016787
Amo01g1048 411 SUPERFAMILY alpha/beta-Hydrolases 153 291 IPR029058 -
Amo01g1048 411 Pfam Pectinacetylesterase 50 384 IPR004963 GO:0016787
Amo01g1048 411 PANTHER PECTIN ACETYLESTERASE 4 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1048 Amo-Chr1 13636329 13638454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1048 5 411 Carbohydrate Esterase AT4G19420 52.036 3.32e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1048 K19882 - gmx:100776802 587.03