Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1041 ATGGGTTGGCCTTACATAGGAGAAACCTTCCAAATGTACTCTCAAGACCCAAATGTCTTCTTTTCCACCAAAATCAAGAGGTATGGTTCTATATTCAAGTCCCACATTTTGGGATGTCCATGTGTTATGATATCAAGCTCAGAAGCTGCAAAATTTGTGCTGAACAAAGCACAATTGTTCAAGCCAACATTCCCAGCCAGCAAAGAGAGGATGTTGGGAAAGCAGGCCATATTCTTCCACCAAGGAGAGTACCATGCCAACCTCAGGAGGCTCGTCCTCCGCACCGTCATGCCCGAAGCCATCAAGAACATCGTCAAGGACATCGAGTCCATTGCCGTCCATGCCCTTCAATCCTGCCAAGGAAAACCCATCACCACTTTCCTCGAATTCAAAACCTACACATTCAACGTTGCACTGCTTTCAATTTTCGGAAAAGACGAGGTTAAGTACAGAGAAGATTTGAAAAAGTGCTACTACACTTTGGAGAAAGGATACAACTCAATGCCGATAAATATTCCTGGAACACTGTTCCACAAGGCCATGAAGGCAAGAAAGGAAATCGCTGAGATAGTTGCGAGAATCATGGCAACAAGGAGAGAAAAGAAAGAAGAGAGTTACAATGATTTGCTGGGTTCGTTCATGGCCGAGAAAGCAGGACTCAGCGATGAACAAATAACAGATAACATCATTGGTGTCATTTTCGCTGCTCGTGACACCACTGCCTCTGTGCTGACGTGGATTGTTAAATACCTCGGTGAAAATCCAACTGTACTGCAAGCAGTAACTGAAGAGCAAGAATCTATAGTGAAGAGGAAGGAGAAAAATGGTGAAGAGATAGGATTGAATTGGGAAGATACAAAGAAGATGCCAATGACTTCAAGGGTGATTCAAGAGACTCTAAGGGTTGCTTCAATATTGTCCTTTACTTTCAGAGAAGCAGTTGAAGATGTTGAGTATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTATTGCCACTTTTCAGAAACATACACCATAGCCCTGACAACTTCAAAGAGCCAGAAAAGTTTGATCCTTCAAGATTTGAGGTGGCTCCCAAACCCAATAGCTTCATGCCATTTGGCAATGGGGTTCATGCATGCCCTGGCAATGAATTAGCTAAGTTGGAGATGCTGGTGCTTCTACATCATCTCACCACAAAATACAGGTGGACTGTGGTAGGTGACAAAAATGGGATCCAATATGGCCCTTTTGCCCTTCCCTTAAATGGGTTGCCCCTAAACTTATACCCAAAATATCAATAA 1284 0.433 MGWPYIGETFQMYSQDPNVFFSTKIKRYGSIFKSHILGCPCVMISSSEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTVMPEAIKNIVKDIESIAVHALQSCQGKPITTFLEFKTYTFNVALLSIFGKDEVKYREDLKKCYYTLEKGYNSMPINIPGTLFHKAMKARKEIAEIVARIMATRREKKEESYNDLLGSFMAEKAGLSDEQITDNIIGVIFAARDTTASVLTWIVKYLGENPTVLQAVTEEQESIVKRKEKNGEEIGLNWEDTKKMPMTSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNSFMPFGNGVHACPGNELAKLEMLVLLHHLTTKYRWTVVGDKNGIQYGPFALPLNGLPLNLYPKYQ* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1041 427 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 1 423 - -
Amo01g1041 427 Coils Coil 180 200 - -
Amo01g1041 427 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS P450 superfamily signature 365 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS P450 superfamily signature 235 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PANTHER CYTOCHROME P450 26 1 423 - -
Amo01g1041 427 Pfam Cytochrome P450 3 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 Gene3D Cytochrome P450 1 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 SUPERFAMILY Cytochrome P450 2 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 367 376 IPR017972 GO:0005506|GO:0016705
Amo01g1041 427 PRINTS E-class P450 group I signature 364 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS E-class P450 group I signature 244 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS E-class P450 group I signature 333 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS E-class P450 group I signature 224 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS E-class P450 group I signature 374 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1041 427 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1041 Amo-Chr1 13568028 13570159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1041 1 420 Cytochrome P450 AT4G19230 73.934 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1041 K09843 - gmx:100170674 738.028