Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1036 ATGCCGAGTATATTCTTTGCAAAACCACTACAATACGCCTCTGTGTCACACCCCTTTTGCCACTATCATCTTTGTCGCGCCGTTAGTTGCACTGCTCGGAATGCGTGTAGTGATTTGCGTTTGTTCCGCTGTCGCGGCCTCCATCCCGACGATTCTCTGGGCAGTGCCGGTGCCCTCCACAACCAATTCCCGTTGCTGCAACGCGCGCTTTGCATGTGCCATTTTCTCCTTCGCAGGACCACCGCGACACCCTCCCCTTCGCTATCTGCATCGCCGTCGTCCACCGCAGTACCCTCTCTCTATCTCATTTCTACCTTCTCAATCCGATCAAAGACACTTCCATTAGAAGACATATGCATAAGGAGACACGTCCAAGACACATCGACAAAGACACTTTCATTAGACACAACCATAAAAAAGATACGAAGCTCTTTATCATATCATGCCAATGCGCGCACTAAGACGTCCGTTTGGCTACTCCTATTTGTTTCTTCTATCTCCCTTACCTCAACACACATGGATGAGAAAGCTAAGTCCTCAGATCATGTTGCTGTCATCATTGACCAGCACACTAACCATCCGAAACCCCCTTCCTCCTCCTCCGTGGACAACAAGCCCCCCAAACAACACCCCTTGAGGGTCAAAACCCTTAACCGTCTCAGCTTCTCGAAGCCCAAATCCAGAATCCTCGACAACATGCTTGGTTTGTTCGCTGGTAATAACGCGGATAAAGAAGATGCACATGGTGGGTTTGGAGATATGGAAGTGGTGCTGTACTTCATATACGGGCTGAGGAAGAGCATAAGGAACTGCATGTGGCTAGGGCTGGTGCTTCTTTCATACTGGAGCGTGGTGTTCGACGACGTGCAGAAGAAGAACCACAAGTTCCTGAACAAGGTGTTTCAGGGACTGGTGGCAGTGCTGGTTGGGGCCATCATATGGCTCGTCAAGATTGTTCTGGTGAAGATGCTGGCATCCTCTTTTCATGTGGCCACCTACTTCGACAGGATGAAGGAGAGCGTCTTCCATCACTACATCCTCGACACTCTCTCAGGTCCGCCCATGGAGGACGCGGAGGAGATACTGCAGCAGCACCGCCTGCTCACGGGAGGCGGATCAAAGTCGATGCCTGCCAGGAGTAGGTTGAATAAGCTGAAGGAGAAGCAGGAGAGGTTCGGGGGTTCCAGGAGGATTGACATGGAGAAGCTGAGGGAGCTGAGCATGGAGAGCACTGCATCCGCCTGGAGCGTCAAGAGGCTCGTCAACTATGTTCGCTCTTCCGGCCTCTCCACCATCTCCAGGACCGTCGATGATTTCACCACCGCCGAGTCTGAGATCAACAGTGAATGGGAAGCTAGAAATTGCGCTCAGCGGATTTTCAACAACGTCGCCAAACCTGCTGCCAAGTACATTGAAGAGGAGGATTTGATGAGATTTCTGAAGAGGGTTGAGATACATACTATATTCCCTCTCTTCGAAGGTGCCCTTGAAACAGGGAAGATCAGCAGATCATCATTTAGAAATTGGGTGATTCGAGCATACTACGAACGAAAGGCACTAGCACAATCACTGAATGATACAAAAACAGCAGTGCAGCAGCTTCACAAACTAGCAAGCGCGATAGTTAGTGTGATAATAATCATTGTGATCCTTTTGGTGATGGGAGTGGCTACGCTCAAGATCATATTCTTCTGCATGACGCAAATCGTGTTGATTGGGGTTGCCTTCCAAGGTACCTGCAAGACCGTCTTGGAGGCCATCATCTTCGTCTTTGTCATGCATCCTTTCGACATTGGAGACCGCTGCGTCATTGATGGTGTTCATATGATTGTGGAAGAGATGAATATCTTGTCAACAGTGTTTCTCAGATACGACAACGAGAAAATATACTACCCTAATGCAGTTCTGCTGAATAAGCCAATCAGCAATTTCTACAGGAGTCCGGAGATGTGGGACTCAATTGATTTCACCATTGATGCTTCTACTCCCATGGAGACTATCATTGCACTCAAGAAATCAATACAAATTTACATTGAGAGCAAGCCAAAGTATTGGAATCCAAAGCACAGTGTGATAGCAAAAGAAATACAGAATGTGGACAAGCTGAAGCTGTGCTTGTGTGTGCAACACACAATCAATCATCAGAACTATGGCGAAAGGAGCATTAGGATCACTGAGCTCCTCTTGGAACTCAAAAAGATCTTTGAGATCCATGCTGTCAAGTACAATCTCCTCCCTCAGGAGATCCACATTACCCAGATGAACATGGAAAATAATGGCAGACTTGTCTTTCAATCATGA 2301 0.4807 MPSIFFAKPLQYASVSHPFCHYHLCRAVSCTARNACSDLRLFRCRGLHPDDSLGSAGALHNQFPLLQRALCMCHFLLRRTTATPSPSLSASPSSTAVPSLYLISTFSIRSKTLPLEDICIRRHVQDTSTKTLSLDTTIKKIRSSLSYHANARTKTSVWLLLFVSSISLTSTHMDEKAKSSDHVAVIIDQHTNHPKPPSSSSVDNKPPKQHPLRVKTLNRLSFSKPKSRILDNMLGLFAGNNADKEDAHGGFGDMEVVLYFIYGLRKSIRNCMWLGLVLLSYWSVVFDDVQKKNHKFLNKVFQGLVAVLVGAIIWLVKIVLVKMLASSFHVATYFDRMKESVFHHYILDTLSGPPMEDAEEILQQHRLLTGGGSKSMPARSRLNKLKEKQERFGGSRRIDMEKLRELSMESTASAWSVKRLVNYVRSSGLSTISRTVDDFTTAESEINSEWEARNCAQRIFNNVAKPAAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASAIVSVIIIIVILLVMGVATLKIIFFCMTQIVLIGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVHMIVEEMNILSTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMWDSIDFTIDASTPMETIIALKKSIQIYIESKPKYWNPKHSVIAKEIQNVDKLKLCLCVQHTINHQNYGERSIRITELLLELKKIFEIHAVKYNLLPQEIHITQMNMENNGRLVFQS* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1036 766 Gene3D - 595 644 IPR023408 -
Amo01g1036 766 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 177 233 - -
Amo01g1036 766 MobiDBLite consensus disorder prediction 192 206 - -
Amo01g1036 766 MobiDBLite consensus disorder prediction 190 210 - -
Amo01g1036 766 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 255 759 - -
Amo01g1036 766 Pfam Mechanosensitive ion channel 536 739 IPR006685 GO:0016020|GO:0055085
Amo01g1036 766 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 255 759 IPR016688 -
Amo01g1036 766 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 177 233 IPR016688 -
Amo01g1036 766 SUPERFAMILY Sm-like ribonucleoproteins 586 644 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1036 Amo-Chr1 13499481 13508273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1036 257 755 Mechanosensitive Ion Channel Family AT5G12080 47.151 5.43e-158 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1036 K22048 - gmx:100813521 845.884