Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1025 ATGGAGATACCAAGAATTTGGCAATGGTTAAATCTTCTAGTATGTGTACTGTTATTAATAAAGTCAGAAGGATCTGGTTTTGTTCCAATCACTTATTTGGAGGATGCAGAGTCAAAAGGAGCCGTTTGTTTGGATGGTAGTCCTCCGGCCTACCACTTTGATAAGGGATCCGGCGAAGGTGTTAACAGCTGGATTGTTCATCTTGAGGGAGGAGGATGGTGCAGTGATGTGTCTTCTTGCCTTGAACGCAAGGACACTCGGTTAGGTTCATCCAAACAAATGGATACACAGGCTGGATTTTATGGAATACTTAACAACCAACAAGATTATAATCCAGATTTCTACAACTGGAACAGAATCAAGATTAGGTACTGTGATGGATCATCATTTACTGGTGATGTGGAAGAAGTTGATCCAACAAACAATCTGCACTTCAGAGGAGCAAGAATTTTTGAAGCAGTCATTAAGCATTTACTTGCAAAAGGAATGGAGAATGCTGAAAATGCTATTCTGTCTGGATGCTCTGCTGGAGGATTGGCTGCTATATTGAACTGCGATCGCTTCAAATCCTTCCTACCAAATGGCGCCAGAGTGAAATGCGTGCCGGATGCCGGCTATTTTATCAATGTACCAGATGTCTCCGGAACAAAGCACATTGAAAATTTCTACAATGGAGTTGTTGAAACACATGGATCAGCAAAGTATTTGTCTAAATCCTGCACTTCAAAATATGGTGCTGGCCTGTGCTTTTTCCCACAATATGTGGCACAAGATATCGCCACGCCCATTTTCGTTGTAAATGCGGCCTATGACTCATGGCAGATTAGAAACATTTTGATACCGAGCATGGCGGATCCACACGGAAGCTGGAAAAACTGCAAAGAGAACATAAGCAATTGCACACCTGATGAACTAGATGCTGTGCAAGGGTTTAGAGAGGATTTCATAAAGGCATTGAGTGGGGTGCAGAACTCTCCATCAAAAGGAATGTTCATAGATTCTTGCTACATCCACTGCCAAACGGGAATGCAAGAGCTTTGGTTCAATCCTGATGCACCTCAGCTTGCAAATACTACTATTGCTAAGGCCGTTGGTGACTGGTTTTATGAACGAAAGCCTTTCCAACACATTGATTGTGCCTTCCCATGCAACCCTACTTGTGGTAAACCTGTCTTAAATGTCAAAGCCCACCCTGAAATCTAG 1203 0.4273 MEIPRIWQWLNLLVCVLLLIKSEGSGFVPITYLEDAESKGAVCLDGSPPAYHFDKGSGEGVNSWIVHLEGGGWCSDVSSCLERKDTRLGSSKQMDTQAGFYGILNNQQDYNPDFYNWNRIKIRYCDGSSFTGDVEEVDPTNNLHFRGARIFEAVIKHLLAKGMENAENAILSGCSAGGLAAILNCDRFKSFLPNGARVKCVPDAGYFINVPDVSGTKHIENFYNGVVETHGSAKYLSKSCTSKYGAGLCFFPQYVAQDIATPIFVVNAAYDSWQIRNILIPSMADPHGSWKNCKENISNCTPDELDAVQGFREDFIKALSGVQNSPSKGMFIDSCYIHCQTGMQELWFNPDAPQLANTTIAKAVGDWFYERKPFQHIDCAFPCNPTCGKPVLNVKAHPEI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1025 400 Pfam Pectinacetylesterase 26 373 IPR004963 GO:0016787
Amo01g1025 400 PANTHER PECTIN ACETYLESTERASE 4 394 - -
Amo01g1025 400 PANTHER NOTUM-RELATED 4 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1025 Amo-Chr1 13412702 13419608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1025 5 400 Carbohydrate Esterase AT4G19420 53.828 5.89e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1025 K19882 - gmx:100776802 594.734