Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0991 ATGTCAACTCATAACGCCACCCGCGACGGCAATAGACCCAATTCATTGGAAGAATGGGTTCGCAATTGGGTGCCGATGAAGAAACACTATGGCTGGTGGATATTCTATGGTGTTGGAGCTATTAATGGAATCGCATTTTTTCCTGCAAGTTCCAACTTGAAGCATCTACTGGGAGAATCAAACCAAGAACTGTGGAAAATCATTGTTTTCGTTATTGTCTCTGTTACTTTGGTTGTTTTGCTAGCTATCCTTCGTCGTTTGGAATGGCCAAAAGTGAAAGATTCATCCTATCGTCGTCAAATCAAAGCATGTGGTGTATTCGGGGCCCTGTTGCTGATCTATGTCTACACCTTCTTTTCTAGTCAAGGAGAAGAACGAGAACAAGAACACCACAATAAGACACCAAAAAGTAAGTTATTATATGGTAGCGTATCGCTTTTTGGATTTGCTCTGATGGCTTTGGCTCTGTCAATTCAGACTAACTACGAATTTGTTAAAGAACTCATGGACTTCTTTGTGGAACAACTTGTGGTGGAGCTCACCAAGATAAAATGGTATTATGGCTTCTTAGGAGCTCTCTTCAGTTTCTTGCTCCTCATTTTCCAATCGTGTAAAGAACCATCTGTCCCTGAAGAGGGCCTTATCCCAATTAGTAGAAGGGACCCAGACTGCATCAACAACACCACCCATGATCTCCGGCAAGTTACTAGAAGGGATTTCTCCTCCGTCTTGGGAAATACTACAAGGGATTCCTCGCCTCTAAGCCTAGCAGAAGATCACGCCGGCAGAGATGCACATCACGATCCAATTGACAGCAACACTACCCCCCTCCTCCTCCCAGATACTAGAACGGATTCCTCGCCTCTAAGCCCGACTCAAGATCGCATCATTCGTGCTCTTAACGAGAAGGATCAGGAACTTGCTGGGAATTTACGGGGTGGTTTGATTGCGTACATCAATGGTTGGACCGACGAGATTCCAGTGCCAATAATGAAAGACACCAACTTCATCAGGGATACGATTAAGCCGACAGTTGAGGCTCTTCGCACAATAGTGACTGGTATGACAGCCACTGATGAAAGAGTGAAGGAATTGTTGGAGACGGGGTACAAATCCAGTCGGATACAGTTTTTTGTGATGTGCAAATCCAAGTTGGAACCGGACAAGGAGGCTCCCGTGAGTGTGATCAAGAAGTGGATTAAACACTGCAACATAGCATTCAAGATACTAATTCCCAACGAAAGAGTGTTGTGTGAAGAAATCCTTGGCAAATCCTCTCCCATCTCCCAACGGTGTTTAATGCACTTTTGCAGTCATGTCAAACAAGATATTTTGAGTTTTGTCCAAGATGATATGCCTACACTGATGGATTTTCCTGAAATAACGCTGGTTTTCACAACAGTGCGTGACCTAATTGTTCCAGAGTTCCAGTCACTCCAATCACTGTTTCCTGAGGAGCAATTCATGACCCCTGAAGTAGTCGACCTCGCAAGAACAGTAGGGACAAAAATCAGGGATCACTATTTCCGGGATAATGATTTCCCTCCCCAAATTGACAAGTCTAGTTCTTGTGAAGTTCATCCAATTACCATCAAAGTAATGCACCGCCTGGGTACTGCTTTTAAAAATAGGGACAACATTGAACCAATCCTCGAAGCATATCCCAGTGACAAAGTTAGAGTTTTTAGGGGATGGTCTTTGATTACAAAATATATAGATTGGAATATCGAGGAGTTTGAGGCCTCTTTGGAAGCCACCATCAATAATGCGTATGATTATGAATTGCGTGGTGTGTCTATCATGGCTAATGTTAATTACATATTAAAGAAGGCCTACGAGTTTAGATTTGAATTAACTGAGGGGGATACTTGGGTCAAAGATCAAGCGCGGAAAATTCAAAGGTGCCGTAACCAATACTGGGACAAGCAGGCTGAGTTGCTGGCCTTTTTGAAGCATCATAATCATAATGAGAATGCGACTAAAGCTTCAGTAGTGAAGGAGATGCTATTTTCATTCGGTGATGGCACGCTTCTTGACAAAAATTACTATCCTTATGACGGCATGCTAGAACCATTCTTGGTCAAGGCCTTTGTCCCGAATTGTGAAATTCTCGTTAAGAGATTCCGTGCTTTACTGAATGGCACAGAGATAGACGATACTGATGAATGGCAATCTTTTGAAGATGAAAGCCAAGAGACGCCGTTGCTTGCTTGGAGTTCGAGGTAG 2226 0.4335 MSTHNATRDGNRPNSLEEWVRNWVPMKKHYGWWIFYGVGAINGIAFFPASSNLKHLLGESNQELWKIIVFVIVSVTLVVLLAILRRLEWPKVKDSSYRRQIKACGVFGALLLIYVYTFFSSQGEEREQEHHNKTPKSKLLYGSVSLFGFALMALALSIQTNYEFVKELMDFFVEQLVVELTKIKWYYGFLGALFSFLLLIFQSCKEPSVPEEGLIPISRRDPDCINNTTHDLRQVTRRDFSSVLGNTTRDSSPLSLAEDHAGRDAHHDPIDSNTTPLLLPDTRTDSSPLSPTQDRIIRALNEKDQELAGNLRGGLIAYINGWTDEIPVPIMKDTNFIRDTIKPTVEALRTIVTGMTATDERVKELLETGYKSSRIQFFVMCKSKLEPDKEAPVSVIKKWIKHCNIAFKILIPNERVLCEEILGKSSPISQRCLMHFCSHVKQDILSFVQDDMPTLMDFPEITLVFTTVRDLIVPEFQSLQSLFPEEQFMTPEVVDLARTVGTKIRDHYFRDNDFPPQIDKSSSCEVHPITIKVMHRLGTAFKNRDNIEPILEAYPSDKVRVFRGWSLITKYIDWNIEEFEASLEATINNAYDYELRGVSIMANVNYILKKAYEFRFELTEGDTWVKDQARKIQRCRNQYWDKQAELLAFLKHHNHNENATKASVVKEMLFSFGDGTLLDKNYYPYDGMLEPFLVKAFVPNCEILVKRFRALLNGTEIDDTDEWQSFEDESQETPLLAWSSR* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0991 741 MobiDBLite consensus disorder prediction 243 291 - -
Amo01g0991 741 PANTHER EXOCYST COMPLEX PROTEIN EXO70 141 671 IPR004140 GO:0000145|GO:0006887
Amo01g0991 741 Gene3D Exocyst complex component Exo70 298 675 - -
Amo01g0991 741 MobiDBLite consensus disorder prediction 256 270 - -
Amo01g0991 741 MobiDBLite consensus disorder prediction 275 291 - -
Amo01g0991 741 Pfam Exo70 exocyst complex subunit 397 672 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo01g0991 741 PANTHER PROTEIN, PUTATIVE-RELATED 141 671 - -
Amo01g0991 741 SUPERFAMILY Cullin repeat-like 344 660 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0991 Amo-Chr1 13014573 13017737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0991 324 711 EXO70 exocyst subunit family AT5G58430 25.175 2.29e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0991 - K07195 ahf:112784657 1079.32