Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0971 ATGATGTCGTGTTCTCCATCATCATCATCATCTGAAGAAGAAGATGAGAGCTTTGAATCTTATCGAAGAGGAGGGTATCATGCTGTTAAAATTGGTGATCAATTTGCAGGTGGTAGGTACATAGCACAAAAGAAGCTTGGTTGGGGTCAATTTTCCACCGTTTGGCTTGCTTATGATACTAAAGATGAGAAATATGTTGCTCTAAAGATCCAGAAAAGTGCAGCACAATTTGTTCAAGCTGCACTTCATGAGATTGATATCCTTTCAGCCATTGGAGATGGCACTCCTTCACACACAAAATTTGTTGCTCAACTAATTGATCACTTCAAGCACACAGGTCCAAATGGAAATCACCTTTGCATGGTTCTTGAGTTTCTTGGTGACAGTTTGCTTCGTCTAATCAAATACACACGTTACAAAGGAATTCCATTGAAAAAAGTTAGGGAGATTTGCACTTGCATATTGATTGGTTTGGATTACTTGCATAGAGAACATGGCATCATCCACACTGACCTAAAACCTGAAAATATTCTTCTTATTTCTCCCATTAATCCATCTAGAGACCCTTTAAGCTCAGGAGCATCTCCCATTCTAGAAAGACCTGAAGGAAGCATCTCTCCATCTCCTAGTCACATGGAGAAGAGGCTCAAGAGGAGGGCGAGGAGGATGAGTATGAGTTTATCGATCGGCCGAGGCGATTCGATAGACGAATATCCGAAAAGGAACATAGAAGAAATTGATGTTAGGTGCAAGATAGTTGATTTTGGGAATGCTTGTTGGGCTGATAATCAATTTACAGATTTGGTTCAGACAAGGCAGTATAGGGCTCCTGAGGTTATATTGCAAGCTGGCTATTCCTACTCTATTGATATGTGGTCTTTTGCTTGTATTGCTTTTGAGCTTGCCACTGGTGACATGTTGTTCAACCCTAGGGCTGGACAGGGTTTTAGTGAAGATGAGGATCACCTTGCTTTGATGATGGAACTCCTAGGAAAGTTCCCTAAGAAGATTGCTACTTCTGGGGCGAAATGTAAGGATTTCTTTGACAGATTTGGAGATTTGAAAAGAATTAGAAGACTAAAAATGTGTCCACTGAAGAAATTGTTGGTTGAAAGGTACAAATTTTCAGAGAAAGATGCCAATGAATTTTCAGAATTTCTTTTGCCACTTCTTGATCTTTCACCAGAGAAAAGGCCAAGTGCACAACAATGCTTGCAACACCCTTGGATCAAGGACATAGACTATGCTCCATTTGACATCATCAATAATGGAAATAGTCTTGAAAATCTCAATGTTGGCATGAGAAACCTTCAAATTGCTGTAGGAAAGTGA 1332 0.4002 MMSCSPSSSSSEEEDESFESYRRGGYHAVKIGDQFAGGRYIAQKKLGWGQFSTVWLAYDTKDEKYVALKIQKSAAQFVQAALHEIDILSAIGDGTPSHTKFVAQLIDHFKHTGPNGNHLCMVLEFLGDSLLRLIKYTRYKGIPLKKVREICTCILIGLDYLHREHGIIHTDLKPENILLISPINPSRDPLSSGASPILERPEGSISPSPSHMEKRLKRRARRMSMSLSIGRGDSIDEYPKRNIEEIDVRCKIVDFGNACWADNQFTDLVQTRQYRAPEVILQAGYSYSIDMWSFACIAFELATGDMLFNPRAGQGFSEDEDHLALMMELLGKFPKKIATSGAKCKDFFDRFGDLKRIRRLKMCPLKKLLVERYKFSEKDANEFSEFLLPLLDLSPEKRPSAQQCLQHPWIKDIDYAPFDIINNGNSLENLNVGMRNLQIAVGK* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0971 443 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 417 - -
Amo01g0971 443 Gene3D Phosphorylase Kinase; domain 1 26 125 - -
Amo01g0971 443 SUPERFAMILY Protein kinase-like (PK-like) 34 417 IPR011009 -
Amo01g0971 443 ProSiteProfiles Protein kinase domain profile. 40 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0971 443 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Amo01g0971 443 Pfam Protein kinase domain 249 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0971 443 Pfam Protein kinase domain 41 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0971 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Amo01g0971 443 PANTHER OS07G0472400 PROTEIN 9 417 - -
Amo01g0971 443 Gene3D Transferase(Phosphotransferase) domain 1 94 410 - -
Amo01g0971 443 CDD STKc_SRPK 29 410 - -
Amo01g0971 443 SMART serkin_6 40 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0971 443 MobiDBLite consensus disorder prediction 188 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0971 Amo-Chr1 12829252 12834007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0971 8 413 EF-hand Containing Proteins AT5G22840 49.024 1.26e-156 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Amo01g0971 Pkinase 2.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0971 K08832 - gmx:100811724 657.136