Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0958 ATGAACTATAAGCATGATGTGTTCATCAGCTTTAGAGGCACTGATGTCCGGCGTGGTCTGCTTAGTCATCTGAAGAAATATCTGCAGCATAAGAAGATTGATTTCTATGTAGATGATCCTAAACTTAATAAGGGAGATAAAATATCATCAATACTCACGGCAATTGAAGAGTCACAAATTCTGTTGATAATAGAGTGTGCTGAAAAAAATGAACAAATTGCTGTGGTACCTGTCTTCTATAAACTAGTTCCAGCAGATGTGCGGCACGAGAGAGGAGATTATGCTGCTGCTTTTGTTAAACATGAAGCTAGGGAAGACAAGGACAAGGTACAAAAATGGAGATCTGCTCTAGCTAAAGCTGCTGAAATTTCAGGATTTACTTATCCGTTGGACTCTGAGTTGGATGAATCCGATCTTGTTGATAAAATTGTAGAAGACATTTGTAGCAAACTGAGAAAGTTTTCCTCAAGTGAATCAGATGACCCAGCTAAATCAAATGGCCTCGTTGGAATTGATAAAAATGTTGGATGGATTAAGTCCTTAATGACAAATGATTCTGAACAACTTCGACAGATTGGAATTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCTCAACTTGTGTTTGACAAATTTTCTCACCAATATGAGGGCTGCTACTTCTTGGAGAATATAAGAGATGAACTGAAAAATAATCAGTTAAATTATTTAAGAGACGAAGTTGTTTCTAAGCTATTAGGGGAAGAAAATCACCATATAACTGGTGCAAGCAGGGCAAATTCCTCCACCATGAGGAGGCTAAGTAAGAAGAAGGTTCTCCTTGTGGTAGATAATGTGAATACTCCAAAGCTTCTAAGAGATTTTCTTGAACCAATTCACTTTGGGCCAGGGAGTAGAGTGATTGTAACTAGCAGAAATAAGCAAGTGTTTACTGCAGGAGTATTTCATGAAATACACCATGTCAAGGAGCTGAACTCTGAAGAATCCCTTGAACTCTTCTGCTTAAATGCCTTCAATGAAAGCCAACCCAAAAGGGGATTCGAAGAGCTATCTAGAGAGGCAGTTGCTATTGCCAAGGGTGTCCCATTAGCTTTAATAGTTTTTGGTTCATATTTCCATTCTAAAAGTAATGACATATGGAAATGTGCCTTAGAAAGATTCAAGAAGTATACTGATCCTGATGGGGAAATTCAAAGTGTGTTGAGGTTTAGTTATGATGAATTACATGACATAGAGAAAAAGGTTTTTCTAGATATTGCATTCTTTTTCAAAGGAGAAGATAAAGATTATGTCATAAGCCAGCTGGATGCTTGGAACTTTCATGGAGCTAGTGGAATAGCCTCTCTCCAAGAGAAAGCTCTTATAGCCATTTCAAAGGACAATAAAATACAAATGCATGATTTAATGCAAAGAATGGGTTGGGAAATCGTTCGTCAAGAATCTGCTAATCCCGGACGACGAAGCCGAGTGAATGATCCAGAGGAAGTGTATGACATATTGAAGAATAACAAGGGAAGTGATTCAGTGGAAGGCATACTGTTAGATTTATCTCAAATCGGAGAGGTAGCCTTGAATGTTGACAGCCTTAAAAAGATGCCTAATCTAAGATTAATCAAGGTTTACTCTCCATTGCCTATTGAGGTTCCTATGCAAATTAGATATTTTATACCACAGGATTTTCTCAGTGTGCTTTACAAAAGAATAAAAATGGATGACTTGACAGAAGAGTTATTGGAAGAATCTGGAAGCTTGAATCAATCATGTGATAATGAGGATATCGATGATGTCGTTGAAACTATCAAGGGAACTCAAGTAGATGGCATAAAAATTCTTGATACTATTATAGAGATGCATATTTTGGGAATGCCTAAATTAAACATGCCGATGCATGTGGAGCATCCTATGCCTGGTTTGCCGATAATGCAGGATTTGGTAAATGATACAACTCAGCCTCTGATGCTGTCGAAGTTGTCTAAGTTAGGGGGTGTTCATAAATTGGCAAATTACAATGAAAATGATGGAGTTCTGGTTTTAGCAACAAATGATCTAAGTAGATCAATGCCACAGCGGAATCCCAACATTGGATCTGCGGTGAAAGAGTTGATCAGCCTTGGAAGTGAGTTTCACGTGAAATCCACTCACCATCTTTTCATGGAAGGTTCCTCAGTTTCAAAGGGCTTGTCCTTGTCAACAAAGGAAATAAGATCAATAAATTCAACCTTTAACAGAACGGAAGCATTGAACTCCTCCGTGGAGCTCTTCAAGAATCTTGAATGCTCAGATGCTAAAGCTCTACAATATTATGCAGAGACTACAATGGAACTATTGAACTCCTCCACGGGGTGCTTCATTTCTCATGATTACTCAGATATTGATGATCTGCAACTTGAGACTACCCGTAAAGATGAGTTATCTTTTCTGAGATCTACAAACTATTACAGGCTTCCTAATTGCAGAGAGAATAAACATATTGGGAAACCGAAGCTTCTAGTCCTGTTTGATGGGCTACGGTATTCCGAACAAATGTCTTTCTTGGTTGTTGGTGGATCGAGCCTCCAATGGAGTTATTTATGGTGCATAAGTAATAATTCTCAGTTTATGCAAATTCCTGTTGGTCCTCAGTTAACGAATTGTGTACAGTTGTCTCTAGAAGTATTTCCAGGGAGTTTGCCTTTGCTTTTGAGCATCATGCATCTTCCTCCGCATCTTAAAAGCCTATCAGTGCATGATGGTAGAAGTTTTTGGCATAAAATAAAGCTTCCACCATTCATTCCAGACGTGCGTACTAGTGGCAGAATGCTCATGTGGCGGGAAAGTTTGCCATCGAAGATCAATCATCATGTGTATCTGAGATTGAGAGATCGTAACAATCTTCGATCTATATCAGAGCTTCCACCATCCATTCAATCCTTGGAAATTTCCAAATGCATTATGCTATTGCGGGATAGTTTGCCTTGGACCTTCAAGTATCTTTCTAGTATTGAAGACCTGACATTAAATGATTGTAACAGTCCTCGATCTATATCAGAGCTTCCACCATCCATTCAATACTTGGAAATTTTCAACTGCATTATGCCGGAGAGTTTGCCTTCGAACTTCAAGTATCTTTCTAGTCTTAAATACCTGACATTGAGATATTGTAACAATCTTCTATCTATATCAGAGCTTCCACCATCCATTCAATCCTTGGAAATTTTCAAATGCTTTATGCTGGATAGTTTGCCTTCGAACTTCAAGTATCTTTCTAATCTTAAAGACCTGACATTAAATAATTGTAACAGTCTTCGATCTATATCAGAGCTTCCACCATCCATTCAATCCTTGGAAATTTCCAAATGCATTATGCTCAAGAGTTTGCCTTTTTCGAACTTCAAGTATCTTTTTAGTCTTAAAGACCTGACATTGAAAGATTTTCTTAAATACCTGACATTGAGATATTGTTACAATCGTCTATCTATATTAGAGCTTCCACCATCCATTCAATCCTTGGAAATTTCCAAATGCATTATGCTCGAGAGTTTGTCTTCAAAACTTCAGGTATTTTCTAGTCTTAAAGATCTGACATTGAGAGATTGTAGCATTCTTCTATCTATATCAGAGCTTCCACCATCCATTCAATCTTTGGAAATTTTCAACTGCCTTATGCTGGAGAGTTTGCCTTCGAACTTCAAGTATCTTTCTAGTCTTAAATACCTGACATTGAGATATTGTAACAATCTTCCATCTATATTAGAGCTTCCACCATCCATTCAATCCTTGGAAATTTCCAAATGCTTTATGCTGGATAGTTTGCCTTCGAACTTCAAGTATCTTTCTAATCTTAAAGACCTGACATTAAATGATTGTAACAGTCTTCGATCTATATCAGAGCTTCCACCATCCATTCAATCCTTGGAAATTTCCAAATGCATTATGCTCAAGAGTTTGCCTTCGAACTTCAGTAATCTTTTTAGTCTTAAAGACCTGACATTGAAAGATTGTAGCATTCTTCTATCTATATCAGAGCTTCCACCATCTATTCAATCCTTGGAAATTTCCAACTCCATTATGCTGGAGAGTTTGCCTTTGAACTTCAAGTATCTTTCTAGTCTTAAAGACCTGACATTGAGAAATTGTAACAATCTTTGGTCTATATAA 4140 0.3768 MNYKHDVFISFRGTDVRRGLLSHLKKYLQHKKIDFYVDDPKLNKGDKISSILTAIEESQILLIIECAEKNEQIAVVPVFYKLVPADVRHERGDYAAAFVKHEAREDKDKVQKWRSALAKAAEISGFTYPLDSELDESDLVDKIVEDICSKLRKFSSSESDDPAKSNGLVGIDKNVGWIKSLMTNDSEQLRQIGIWGMGGIGKTTIAQLVFDKFSHQYEGCYFLENIRDELKNNQLNYLRDEVVSKLLGEENHHITGASRANSSTMRRLSKKKVLLVVDNVNTPKLLRDFLEPIHFGPGSRVIVTSRNKQVFTAGVFHEIHHVKELNSEESLELFCLNAFNESQPKRGFEELSREAVAIAKGVPLALIVFGSYFHSKSNDIWKCALERFKKYTDPDGEIQSVLRFSYDELHDIEKKVFLDIAFFFKGEDKDYVISQLDAWNFHGASGIASLQEKALIAISKDNKIQMHDLMQRMGWEIVRQESANPGRRSRVNDPEEVYDILKNNKGSDSVEGILLDLSQIGEVALNVDSLKKMPNLRLIKVYSPLPIEVPMQIRYFIPQDFLSVLYKRIKMDDLTEELLEESGSLNQSCDNEDIDDVVETIKGTQVDGIKILDTIIEMHILGMPKLNMPMHVEHPMPGLPIMQDLVNDTTQPLMLSKLSKLGGVHKLANYNENDGVLVLATNDLSRSMPQRNPNIGSAVKELISLGSEFHVKSTHHLFMEGSSVSKGLSLSTKEIRSINSTFNRTEALNSSVELFKNLECSDAKALQYYAETTMELLNSSTGCFISHDYSDIDDLQLETTRKDELSFLRSTNYYRLPNCRENKHIGKPKLLVLFDGLRYSEQMSFLVVGGSSLQWSYLWCISNNSQFMQIPVGPQLTNCVQLSLEVFPGSLPLLLSIMHLPPHLKSLSVHDGRSFWHKIKLPPFIPDVRTSGRMLMWRESLPSKINHHVYLRLRDRNNLRSISELPPSIQSLEISKCIMLLRDSLPWTFKYLSSIEDLTLNDCNSPRSISELPPSIQYLEIFNCIMPESLPSNFKYLSSLKYLTLRYCNNLLSISELPPSIQSLEIFKCFMLDSLPSNFKYLSNLKDLTLNNCNSLRSISELPPSIQSLEISKCIMLKSLPFSNFKYLFSLKDLTLKDFLKYLTLRYCYNRLSILELPPSIQSLEISKCIMLESLSSKLQVFSSLKDLTLRDCSILLSISELPPSIQSLEIFNCLMLESLPSNFKYLSSLKYLTLRYCNNLPSILELPPSIQSLEISKCFMLDSLPSNFKYLSNLKDLTLNDCNSLRSISELPPSIQSLEISKCIMLKSLPSNFSNLFSLKDLTLKDCSILLSISELPPSIQSLEISNSIMLESLPLNFKYLSSLKDLTLRNCNNLWSI* 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0958 1379 Gene3D Ribonuclease Inhibitor 1295 1379 IPR032675 -
Amo01g0958 1379 SUPERFAMILY L domain-like 876 1214 - -
Amo01g0958 1379 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 126 IPR035897 -
Amo01g0958 1379 Gene3D - 64 154 IPR035897 -
Amo01g0958 1379 Gene3D - 2 63 IPR035897 -
Amo01g0958 1379 PRINTS Disease resistance protein signature 990 1006 - -
Amo01g0958 1379 PRINTS Disease resistance protein signature 191 206 - -
Amo01g0958 1379 PRINTS Disease resistance protein signature 359 373 - -
Amo01g0958 1379 PRINTS Disease resistance protein signature 267 281 - -
Amo01g0958 1379 Pfam TIR domain 63 160 IPR000157 GO:0007165
Amo01g0958 1379 SMART till_3 4 123 IPR000157 GO:0007165
Amo01g0958 1379 Gene3D Ribonuclease Inhibitor 710 1138 IPR032675 -
Amo01g0958 1379 Gene3D - 324 410 IPR042197 -
Amo01g0958 1379 Gene3D Ribonuclease Inhibitor 1139 1294 IPR032675 -
Amo01g0958 1379 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 550 IPR044974 GO:0006952
Amo01g0958 1379 Pfam NB-ARC domain 178 390 IPR002182 GO:0043531
Amo01g0958 1379 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 550 - -
Amo01g0958 1379 SUPERFAMILY L domain-like 1140 1376 - -
Amo01g0958 1379 Gene3D - 155 316 IPR027417 -
Amo01g0958 1379 SUPERFAMILY "Winged helix" DNA-binding domain 397 482 IPR036390 -
Amo01g0958 1379 ProSiteProfiles TIR domain profile. 3 151 IPR000157 GO:0007165
Amo01g0958 1379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 420 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0958 Amo-Chr1 12700263 12725303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0958 5 542 WRKY Transcription Factor Family AT4G12020 33.272 4.96e-63 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0958 - - adu:107475985 2175.21