Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0939 ATGGCTCTAGGAACTAATTTCAAGCCTCAAATAGCTACATTATTGGATCAAAATGGTGAAAGAATTATTGGGGATTTAAATCACAATATTAGAAAACCTCCAAAAGATCATTCAATTATTCGCCATTGCAGCAGTAACGTATGGTTGGCTAAATCGGTTAGGGAATTAGACATTGGGATTGAAGACTTGAAAGCAAATCCAGAAGAGAAATCAAAGTTTTCACCAACATTGCGATTTGGAAGTTGTTCTGAGAAAGGACCAAAGCAGTTCATGGAAGATGAGTTTATTTGTGTTGATATCATTCACGAATATTCCAGTGCTGCTACCATGCCTTCTCCAGCAGGATTTTATGGGGTATTTGATGGGCATGGAGGAATTGATGCGGCATCATTTACCAAAATAAACATTCTTAAGCTAATAGTTGAAGATTCACATTTTCCATCCAACATTAAGAAAGCTATTAAGAGTGCATTTGTGAAAGTGGATCATGCATTTGCAGATGCTACTTCACTTGATAGTTCTTCAGGCACCACAGCAATTGTTGCCCTTATTTTGGAAAGGGACTTGATAGTTGCCAATGTGGGGGATTCTCGTGCCGTAATGGGAAAAAGAGGTAAAGCCATAGAACTTTCCAAAGATCATAAGCCAAACAGCACTTCTGAAAGATTAAGAATTGAGAAACTAGGTGGTGTGATCTATGATGGATACCTCAATGGACAACTATCAGTGGCACGTGCTCTTGGGGATTGGCACATCAAAGGTTACAAAGGTAATTCAATGTGCCCATTAAGCTCAGAGCCAGAATTAGAAGAGGTTGTATTAACAGAAGAAGATGAGTTCTTAATAATGGGGTGTGATGGATTATGGGATGTGATGAGTAGCCAATATGCTGTGACAATGGTGAGAAAGGAGCTGATGAAACACAATGATCCAATGGAATGTGCAAGAGCTCTTGTTTCTGAAGCACTTCAACGCAATGCATGTGACAATCTCACTGTTTTGGTCATTTGTTTCTCCATGGATCCACCTCCTAAGATTGAAATCATCTCTAGGTTACATAAGAGGAGGAGTATTTCTGCTGAAGCCATTGATGTTCTCAAGGGTTTGATCAATGCCACAACTTAA 1125 0.392 MALGTNFKPQIATLLDQNGERIIGDLNHNIRKPPKDHSIIRHCSSNVWLAKSVRELDIGIEDLKANPEEKSKFSPTLRFGSCSEKGPKQFMEDEFICVDIIHEYSSAATMPSPAGFYGVFDGHGGIDAASFTKINILKLIVEDSHFPSNIKKAIKSAFVKVDHAFADATSLDSSSGTTAIVALILERDLIVANVGDSRAVMGKRGKAIELSKDHKPNSTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGYKGNSMCPLSSEPELEEVVLTEEDEFLIMGCDGLWDVMSSQYAVTMVRKELMKHNDPMECARALVSEALQRNACDNLTVLVICFSMDPPPKIEIISRLHKRRSISAEAIDVLKGLINATT* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0939 374 Gene3D - 60 341 IPR036457 -
Amo01g0939 374 ProSiteProfiles PPM-type phosphatase domain profile. 78 338 IPR001932 -
Amo01g0939 374 SMART PP2C_4 68 336 IPR001932 -
Amo01g0939 374 Pfam Protein phosphatase 2C 78 330 IPR001932 -
Amo01g0939 374 SUPERFAMILY PP2C-like 70 338 IPR036457 -
Amo01g0939 374 CDD PP2Cc 78 338 IPR001932 -
Amo01g0939 374 PANTHER PROTEIN PHOSPHATASE 2C 24 355 IPR015655 GO:0004722|GO:0006470
Amo01g0939 374 SMART PP2C_SIG_2 93 338 IPR001932 -
Amo01g0939 374 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 24 355 - -
Amo01g0939 374 ProSitePatterns PPM-type phosphatase domain signature. 116 124 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0939 Amo-Chr1 12494174 12499320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0939 71 371 PP2C-type Phosphatase Gene Family AT3G51470 74.086 2.60e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0939 K14803 - zju:107424335 489.189