Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0922 ATGGGTGGTTCTGATGAAAACAATTCTAATTCAACCTTGCCCAGAATTCTTCAAGCAGGGATGAATAATCAGAATCAGAATGTTGGTACAAGAAAGTTTGGACAGAACAGAAGAGCATTGAGTGTGATCAATCAGAATCTAGTGCAAGGTCGATCTTACCCTTGTGTTGTTAACAAGAGACCTTTGCCTGGAAAACAAGAAATGTGTGAAAAGAAGCAGGCAGATCCAGTGCATCGTCCCATCACAAGGAGGTTTGCTGCTCAAATTGCTTCCCAGCAACAACAATCTTGTGCTGAGGATCCTACCAAGTCGAACCCCTCGAATTCGACCAGATTTGAAGACTTAATCCTCATCGATGAGGAACAAAAGTTAACAGCAGATCAACCAGTGCCCATGTCCTTGGAGAAACCAAAACTAGTGCAGGAGGAAATTGAGATGGAGGATATAGTTGAGGAGGAGTCTATTATAAACATCGATAGCAGCGATGTGGATGATCATCTTGCGGTGGTTGAATACATCGAAGATCTTCATGCACACTACAGAAAATTTGAGAGTTTGAACTGTGTCTCGCCGGATTATATGGCGCAACAATTTGACATTAATGAAAGAATGAGGGCTATACTTGTTGACTGGCTCATTGAGGTGCATGATAAATTCAACCTGATGCAAGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTCTTGGCCAAACAAACTGTGATACGAAAGAAGCTTCAGCTGGTTGGTTTGGTTGCCATGCTTTTGGCTTGCAAGTATGAGGAAGTTTCTGTGCCGGTGGTTGGCGATTTAATCCTTATTTCGGATAAAGCTTACACAAGGAAGGATGTTCTGGACATGGAGAAGTTGATGCTCAACACATTGCAGTTTAACATTTCTGTGCCAACTGCATATGTTTTTATGAGAAGATTCCTGAAGGCAGCTCAAGCCGACAAAAAACTTGAGCTGCTGGCTTTCTTCTTGATAGAGCTCTCTCTTGTGGAATATGATATGCTGAAGTTCCCGGCATCTTTGCTAGCTGCGGCCGCAGTCTACACGGCTCAATGCACTGTCAGTGGCTTCAAACAATGGAACAAGACATGTGAATGGCACACAAACTACTCAGAAGATCAGATATTCGAGTGCTCTCGGATGATGGTTGGCTTACACCAGAAGGCCGCGACTGCGAAACTCACTGGTGTGCGTAGGAAGTACAGTTCATCTAACTATAGCTATACTGCAAAATGCGAACCGGCATGTTTTCTTCTGGAGAACCAATTCTAG 1287 0.4305 MGGSDENNSNSTLPRILQAGMNNQNQNVGTRKFGQNRRALSVINQNLVQGRSYPCVVNKRPLPGKQEMCEKKQADPVHRPITRRFAAQIASQQQQSCAEDPTKSNPSNSTRFEDLILIDEEQKLTADQPVPMSLEKPKLVQEEIEMEDIVEEESIINIDSSDVDDHLAVVEYIEDLHAHYRKFESLNCVSPDYMAQQFDINERMRAILVDWLIEVHDKFNLMQETLFLTINLIDRFLAKQTVIRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKDVLDMEKLMLNTLQFNISVPTAYVFMRRFLKAAQADKKLELLAFFLIELSLVEYDMLKFPASLLAAAAVYTAQCTVSGFKQWNKTCEWHTNYSEDQIFECSRMMVGLHQKAATAKLTGVRRKYSSSNYSYTAKCEPACFLLENQF* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0922 428 Gene3D - 189 301 - -
Amo01g0922 428 SMART cyclin_7 307 389 IPR013763 -
Amo01g0922 428 SMART cyclin_7 210 294 IPR013763 -
Amo01g0922 428 CDD CYCLIN 301 388 IPR013763 -
Amo01g0922 428 SMART Cyclin_C_2 303 420 IPR004367 -
Amo01g0922 428 CDD CYCLIN 204 293 IPR013763 -
Amo01g0922 428 PANTHER CYCLIN-B2-1 25 423 - -
Amo01g0922 428 SUPERFAMILY Cyclin-like 302 419 IPR036915 -
Amo01g0922 428 SUPERFAMILY Cyclin-like 164 300 IPR036915 -
Amo01g0922 428 PIRSF Cyclin_A_B_D_E 3 428 IPR039361 -
Amo01g0922 428 Pfam Cyclin, N-terminal domain 179 301 IPR006671 -
Amo01g0922 428 MobiDBLite consensus disorder prediction 89 109 - -
Amo01g0922 428 Pfam Cyclin, C-terminal domain 303 418 IPR004367 -
Amo01g0922 428 PANTHER CYCLINS 25 423 IPR039361 -
Amo01g0922 428 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Amo01g0922 428 Gene3D - 175 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0922 Amo-Chr1 12342958 12346369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0922 1 424 Core Cell Cycle Gene Families AT1G20610 55.427 8.29e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0922 K21777 - gmx:100779889 572.392